Populus trichocarpa (black cottonwood): 7470684
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Entry
7470684 CDS
T01077
Name
(RefSeq) eukaryotic initiation factor 4A-9
KO
K03257
translation initiation factor 4A
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7470684
03012 Translation factors [BR:
pop03012
]
7470684
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7470684
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
7470684
mRNA cycle factors
Stress granule specific factors
7470684
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-4
7470684
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7470684
Exosomal proteins of bladder cancer cells
7470684
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF8050
Motif
Other DBs
NCBI-GeneID:
7470684
NCBI-ProteinID:
XP_002308545
UniProt:
B9HDC5
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All DBs
Position
6:23037423..23040571
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AA seq
413 aa
AA seq
DB search
MASSAPEGSQFDARQFDSRMNELLTAEGQDFFTSYDEVHETFDAMNLKENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYDIVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTRDDERMLSDIQRFYNVTVEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcggcacctgaaggatcccagtttgatgctcgtcaatttgattctaggatg
aatgagctgctcacagctgaaggacaggatttctttacctcctatgatgaggtgcatgaa
acttttgatgctatgaatttgaaggagaaccttctgaggggtatttacgcatatggtttt
gagaagccatctgcaattcagcaaagagggattgtcccattctgcaagggacttgatgta
atccaacaagcacaatcaggaactggaaagacagctacgttttgctctgggattttgcag
cagcttgattatgatatagttgaatgccaagcattggttcttgcacctacccgagaacta
gctcaacagattgaaaaggttatgagagcactaggtgattatctgggtgtgaaggttcat
gcttgtgttggtggaaccagtgttcgtgaggatcagcgtattctctcagctggggttcat
gttgtagtcggtactcctggtcgtgtgtttgacatgttgcggagacaatcacttcgccct
gactatatcaagatgtttgtattggatgaagcagatgaaatgctctcaagaggattcaag
gatcagatatatgatattttccaattactgcccccaaagattcaggttggggtcttctct
gctactatgccacctgaggccctagaaattacgaggaagttcatgaataaacctgtgagg
attttagtgaagcgtgatgagcttacccttgagggtatcaagcaattctatgttaatgtt
gacaaggaggaatggaagcttgagacactttgtgatctatatgagaccttggcaataacc
caaagtgttatctttgtgaacaccaggcgcaaggtggattggctcacagacaagatgcgc
agtcgtgatcacacagtctctgccactcatggagatatggaccaaaacacaagggacatt
attatgcgagaattccgctctggttcctctcgtgtgctgatcactactgatctgttggcc
cgtggtattgatgtccagcaagtctcacttgtgatcaattatgatctccctacccagcca
gagaactacctccatcgtattggtcgtagtggacgttttggaaggaagggtgttgctata
aactttgttaccagggatgatgaaagaatgctttctgacatccagagattctataatgta
acggttgaggagctgccatcaaatgttgctgatcttctttga
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