Populus trichocarpa (black cottonwood): 7470693
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Entry
7470693 CDS
T01077
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7470693
Peptidases and inhibitors [BR:
pop01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
7470693
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
TIP49
AAA_16
RuvB_N
AAA_22
DUF5906
nSTAND3
ORC-CDC6-like
AAA_14
AAA_2
AAA_25
AAA_28
AAA_17
IstB_IS21
Mg_chelatase
AAA_33
AAA_7
NACHT
Parvo_NS1
AAA_18
bpMoxR
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
7470693
NCBI-ProteinID:
XP_024459259
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Position
6:23186469..23192396
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AA seq
714 aa
AA seq
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MAWRRLITQVSRHQSELGQFKNLFVRTYFPINKFGGSVGNRILNAERRFQSSYVGNLARR
MRDMDDGSEVLQLKELLRHDPEAVIRLFESQPSLYGNPSALSEYVKALVRVDRLDDSELL
KTLQRGISNSAREEESIGGLSVFRNVGKSTKDGVLGTAGTPIHMVATEGGHFKEQLWRTI
RTIALAFLLISGVGALIEDRGISKGLGLNEEVQPSMESNTKFNDVKGVDEAKAELEEIVH
YLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVG
ARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGII
VIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMSKILKGEDVDLMIIARG
TPGFSGADLANLVNIAALKAAMDGAKSVTMTDLEYAKDKIMMGSERKSAVISAESRKLTA
FHEGGHALVAIHTEGALPVHKATIVPRGMSLGMVAQLPDKDETSVSLKQMLARLDVCMGG
RVAEELIFGENEVTSGASSDLQQATNLARAMVTKFGMSKEVGVVTHNYDDNGKSMSTETR
LLIEKEVKYFLERAYNNAKKILTTNSKELHALANALLEQETLSGSQIKALLAQVNSQQQR
QQPQQQQIVASHSSSQSNPVPPSTPNPAASAAAAAAAAAANAAAKAKGIAPVGS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaggcgcctaatcactcaggtttcgaggcatcaatcagagttgggacaattc
aaaaacttgtttgtcagaacttattttcccataaacaagtttggaggcagtgtagggaat
aggattttaaatgctgagaggaggttccaatcaagttatgttggtaatttagctcgtagg
atgcgtgatatggatgatggtagtgaagttctacaacttaaagaacttctacgacatgat
cctgaagcagtgataagactttttgaaagtcaaccatctttatatggcaatccttcagca
ctttctgaatatgttaaggcattggtcagagttgacaggctggatgacagcgagttgctg
aagaccctgcagagaggtatttccaactcagcaagggaagaggaaagtataggaggtctt
tcagttttcaggaatgtgggaaaatctacaaaagatggtgttcttggaactgctggcaca
cctattcacatggtggctacagaaggagggcattttaaagagcagctttggcgtacaatc
cgcactatcgcgctggcctttctgttgatttctggtgtgggcgctcttattgaggacaga
ggaatcagtaaaggacttggtctaaatgaggaggtgcagcctagcatggaatctaacacc
aaatttaatgatgtaaagggtgtcgatgaggcaaaggcagaactagaagaaattgtccac
tatcttcgagatccaaagcgcttcactcgtctaggtggcaagctccctaaaggtgttttg
cttgttggaccacctggcactggcaagacaatgttagccagagctattgctggagaagct
ggggttccttttttctcatgcagtggcagtgagtttgaggagatgtttgttggagttgga
gctcgaagggtgagggatcttttttctgctgcaaagaagcggtcaccatgtataatattt
attgatgagatagacgctattggaggaagccgcaacccgaaggaccaacagtacatgaaa
atgactttgaatcagttgcttgttgaattggatggatttaagcaaaatgaaggtatcatt
gtgatcgcggcgacgaattttccagaatcactggacaaggcactggtgagacctggacgg
tttgaccgccacattgttgttcctaatccagatgtagaaggcaggcggcagattatggaa
tcccacatgtcaaagatcttgaagggtgaagatgttgatttgatgattattgctagaggg
actcctggtttctctggtgctgatctcgcaaatttggtcaacattgctgctctcaaggct
gctatggatggtgctaaatcagtgaccatgactgatctagaatatgcaaaggacaagatc
atgatgggaagtgagcgcaagtcagctgtaatttctgccgagtcacggaagctgacggct
ttccatgagggtgggcatgcccttgtggccatccatactgaaggggctcttcctgttcac
aaggcaacaatagttcccagaggtatgtctcttggcatggttgcccaattgcccgacaag
gatgagacaagtgtatctctcaagcaaatgcttgctcggttagatgtttgcatggggggt
cgggttgcagaagagctgatttttggagaaaacgaagttacctcaggtgcttcttctgat
ctccagcaagctactaatcttgctagagcaatggttacaaagttcggcatgagtaaagaa
gttggagttgtcacccacaattatgatgacaatgggaagagcatgagtactgagactagg
cttcttattgagaaagaagtgaaatatttcctggaaagggcttacaacaatgcaaaaaaa
atcctcaccaccaacagcaaggagcttcatgcgcttgctaatgctttgcttgagcaagaa
acgctctcagggagtcagatcaaggctctgcttgcccaagtcaattctcagcagcagcgg
caacagccgcagcagcagcagatagttgcatcacacagcagttcacagtccaaccctgtg
cccccctcgacccctaatccagctgcatctgccgccgctgcagccgccgccgccgccgca
aatgcagcagctaaagctaaaggcattgctcctgttggatcttag
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