Populus trichocarpa (black cottonwood): 7470752
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Entry
7470752 CDS
T01077
Name
(RefSeq) telomere repeat-binding factor 1 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7470752
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7470752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
HTH_Hrp3
Myb_DNA-bind_6
CHDCT2
Motif
Other DBs
NCBI-GeneID:
7470752
NCBI-ProteinID:
XP_002300277
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All DBs
Position
1:30450989..30455178
Genome browser
AA seq
305 aa
AA seq
DB search
MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNISVMV
NGYGSREKPKLAPKMVHHVLRQDENPMAVDQTDEDISDAKPLAVSSGALLVANPKRTTVR
LDNLIMEAITSLKEPGGSHKTAIASYIEEQYWPPNDFKRILSAKLKYLAANGKLIKVKRK
YRIAPTSVFAERRRVSPLLLEGRQRISPKIERDGFNMFTMSQIDLDLGRMRTMTAEQAAE
VAARAVAEAEAAIAVAEEATREAETAEADAEAAQAFAETARKTLKGRTTPKMVDFITASF
LNDLF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaccgaaacagaaatggacagcagaagaagaagcagcgctaaaagctggagtt
attaagcatggagctggaaaatggcgcacgattcttaaagatccagaatttagtggtgtc
ttgtatctgcgttcaaatgtggatcttaaggacaaatggagaaacataagtgtaatggta
aatggctatggatcaagagagaagcctaagttagcacctaagatggtgcaccatgtccta
agacaggatgagaaccctatggctgttgatcaaaccgatgaagatatttcagatgccaag
cctcttgcagttagcagtggtgcattgctggttgctaatccaaagagaactactgtaagg
ctggataatcttataatggaggcaataactagcttgaaggagcctgggggctcacataag
acagcaattgcttcatacatagaggaacaatattggccaccaaatgactttaagaggata
ttatcagcgaaattgaagtatttggcagctaatggtaaactgattaaggttaaacggaag
tatagaattgcacctacttcagtgtttgccgagagaagaagggtttctcccttactattg
gaaggaagacagaggatctctcctaaaattgaaagggatggtttcaatatgtttacaatg
tctcagattgatttggatctgggcaggatgaggactatgactgcagaacaggctgctgag
gtagcagctcgagcagttgcggaggcagaagctgccatagcagtagctgaagaggcaaca
agggaggctgagacagcagaagctgacgcagaggcagcacaagcatttgctgaaacagct
aggaagacactgaaaggaaggaccacccccaagatggtagactttatcactgcatctttt
ctgaatgatttgttttga
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