Populus trichocarpa (black cottonwood): 7470758
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Entry
7470758 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7470758 isoform X1
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7470758
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
7470758
Ribosome biogenesis [BR:
pop03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
7470758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
SH3_13
Motif
Other DBs
NCBI-GeneID:
7470758
NCBI-ProteinID:
XP_024463010
LinkDB
All DBs
Position
1:30246460..30250631
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AA seq
283 aa
AA seq
DB search
MQALNPLQPGFTKLFNRQLLKPLNLRAFSSSSDDYSNQSRGGLPRFFSEELPASKGGVVR
VQGDEFRHMTKVLRLGTNDRVELFNGKGGLIEGCIERIDRTGLDFVALEDPKLVPPLSTK
WHVYAAFGTLKGDRADWLLEKCTELGAHSVTPLLTERSPSISENRVDRFRRVILAATKQS
QRLHEMILNPPTKIVGLLPLLAQSKLSFLATAGATPVVSVLTSSRKESSGLMIVGPEGDF
TEKEVNMMMKAGASAVGLGPHRLRVETATMALLATLMLWSDSQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgttaaacccattacaacctggttttaccaaactcttcaaccgtcaattgctt
aaacccttaaacctccgtgcattctcatcatcatcagatgattactccaaccagtcacgt
ggtggcctccctcgcttcttctctgaagaactccctgcttctaagggtggcgttgttcgt
gtacaaggcgatgaattcaggcatatgactaaagttttgaggttgggcacgaatgatagg
gtagagctcttcaatgggaaaggaggtttaatagaagggtgcatagagagaattgaccgt
actggacttgattttgttgcactggaagatccaaaattagttcctcctctgagcacaaag
tggcatgtatatgcagcatttggtactctaaagggtgatcgagctgactggcttcttgag
aaatgcacggaacttggagctcatagtgtgacccctctactgactgaacgttctccatca
atctcagaaaatcgagtggacaggtttcgacgtgtcattttggcagcaactaaacagagt
cagcggttgcatgaaatgattctaaatcctccaactaaaattgttggccttttgccccta
cttgcccagtcaaagctatcttttctggcaacagcaggagctactcctgttgttagtgta
ttgacttcatcaagaaaagaatctagtggattgatgatagtgggaccagaaggggacttt
acggagaaagaagtgaacatgatgatgaaagctggcgcatcagctgttggtcttggaccc
catcgcctccgtgttgaaactgcaacaatggcacttttggctactctaatgctatggtct
gactcccagtag
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