Populus trichocarpa (black cottonwood): 7470780
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Entry
7470780 CDS
T01077
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2 isoform X2
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7470780
Transporters [BR:
pop02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
7470780
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GFIT
Motif
Pfam:
MFS_1
OATP
Motif
Other DBs
NCBI-GeneID:
7470780
NCBI-ProteinID:
XP_002300304
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Position
1:29924896..29935508
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AA seq
502 aa
AA seq
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MASSSTALSPPKPSWITPERLLAIFCVINLINYVDRGAIASNGVNGSRRSCSKSGTCTSG
RGIQGDFNLSNFEDGVLSSAFMVGLLVACPIFASLAKSVNPFRLIGVGLSVWTVAVVGCG
FSINFWSITVCRMLVGVGEASFISLAAPFIDDNAPPAKKTLWLGMFYMFIPAGYAAGYVY
GGLVGDHFSWRYAFFGEAVLMLPFAVLGFVMKPLQLKGFAPAESTEALTSIETTSLEVQD
TDVSVVKGSMKSSKSKCAFVDLKQFSRFMKDLKVLLLDKVYVVNVIGYIVYNFVLGAYSY
WGPKAGYSIYNMSNADLIFGGITIVCGIVGTLAGGYVLDLINSTISNAFKLLSAVTFAGA
IFCFSAFCFKSMYPFLALFAIGELFVFATQAPVNFICLHCVKPSLRPISMAISTVAIHLF
GDVPSSPLVGVLQDQTNNWRKTALILTFILFPAAVIWFIGIFLHSVDRFDEASEHPEVTT
TDGSDTTPLLDRKAAGTTETEP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtagttctactgcattatcacctcctaaaccttcatggataactccagaaagg
ctgctagctatcttttgtgtgatcaacttgataaattatgtggatagaggagcgattgca
agcaatggtgtcaatgggagtcgtagaagctgctcaaaaagtggtacatgcacatccggc
agaggaatacaaggggactttaacctgagcaattttgaagatggagttttatcctcagct
ttcatggttggacttctcgtggcttgcccaatatttgcatcattagcaaagagcgtgaat
ccatttaggctcattggagttggattatcagtttggacagttgccgttgttggttgtggg
ttttcaattaatttctggagcattacagtctgccgcatgctagtcggtgttggtgaggct
tcatttataagtcttgcagccccttttatcgatgataacgcccctcctgccaagaaaact
ttatggcttggaatgttttacatgtttataccagctggctacgctgctggctacgtatat
ggtggactggttggtgaccatttcagttggcgctacgctttctttggagaggcggttttg
atgcttccatttgctgttttaggttttgttatgaaacctttgcagttgaaaggttttgct
cctgctgaatctaccgaagcgctgacatccatagagacaacttctttggaagttcaagat
acagatgtctctgttgtcaaaggctcaatgaaatcttccaagtcaaaatgtgcatttgtt
gatttgaagcaattctcaagatttatgaaagacttgaaagtgcttttgcttgacaaggtt
tatgtagtgaatgttataggttacatagtgtacaatttcgtccttggtgcatattcatat
tggggacctaaagcaggctatagcatttataacatgagcaatgcagatctgatatttgga
ggaattaccatagtctgtggtatagttggcacactagcagggggttatgttctggatctc
ataaattccacaatttctaatgcttttaagcttctttcagcagttacatttgccggggca
atattttgtttcagtgccttctgttttaagagcatgtatcccttccttgccctttttgct
attggtgaactatttgtctttgcaactcaggctcctgtaaatttcatatgtcttcactgt
gttaaaccaagtttgagaccaatatctatggctatctccactgttgcaattcacctcttt
ggagatgtgccttcctcaccacttgttggtgttctccaggatcaaactaacaactggagg
aagactgctcttattctgacattcattttgtttccagcagctgtgatatggtttataggt
atatttctgcacagcgtggatagatttgatgaagcaagtgagcatcctgaagtgactaca
actgacggatctgacacaacgcctttgcttgataggaaggcagcaggaacaacagaaaca
gaaccatga
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