Populus trichocarpa (black cottonwood): 7471077
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Entry
7471077 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 3
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7471077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7471077
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7471077
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC2_membrane_3
AAA_29
RsgA_GTPase
AAA_22
AAA
AAA_28
AAA_16
AAA_18
AAA_30
Rad17
nSTAND3
ABC_trans_N
RNA_helicase
NACHT
AAA_19
AAA_11
nSTAND_NTPase5
AAA_5
RuvB_N
T2SSE
Motif
Other DBs
NCBI-GeneID:
7471077
NCBI-ProteinID:
XP_052311172
LinkDB
All DBs
Position
8:6174438..6183224
Genome browser
AA seq
1459 aa
AA seq
DB search
MNSQMSSTVKIEYLQDIELTESGRSTVSSASGSQVPSFHGVSIGNSDHYVSNGVVENDLQ
QRDTIERLPTFERITTALLDEVDDGKTGNKQADVKGKRIVNVAKLGAQDRHMLIEKLIKH
IENDNLQLLQKLRERLDQVGVEFPTVEVRYRSLCVEAECEVVHGKPLPTLWSTAKGMLSG
IANLSCLRQRAKISILKDVRGIIKPRTMTLLLGPPGCGKTTLLLALAGKLSHSLELSGEL
SYNGYGLGEFVPQKTSAYVSQYDLHIPEMTVRETIDFSACCQGIGSRAEILMEVIRREKQ
AGIHPDSDVDTYMKGISVEGLKSTLQTDYILKILGLDICSDTMIGDAMRRGISGGQKKRL
TTGEMIVGPTKALFMDEISNGLDSSTTSQIVSCLQQMAHVTHDTVLISLLQPAPETFDLF
DDVILMAEGKIVYHGPRSSICKFFEDCGFRCPERKGVADFLQEVISRKDQAQYWYCKEQP
YSYVSIDEYVKKFKESEFGQKLDEELSKPFAKSESHKTALSFEKYSLPKWELFKVCSTRE
FLLMKRNYFIYVFKSVLLVFIASVTMTVLLRTRMAVDPIHANYYMGALFYALIIILVDGL
PELLMTVSRLAVFNKQRELCFYPAWAYAIPAAILKVPLSFLEAFVWTTLTYYVIGYSPEV
SRFFRQFLLFFLVHLTSTSMYRFIASIFQTVVASTLAGSLIVLIVLLFGGFLIQKPSMPA
WLEWGFWFSPLTYGEIGLTVNEFLAPRWGKVVSANATIGQRILESRGLNFHSYFYWISVG
ALIGFTVLFNVGFTLALTFLKSPGKTRAIISYEKYNRLQGKIDGGVCVGKNKTPTSACSK
SSTGPNKGRLVLPFELLTFTFKDVQYYVDTPLEMRKRGFLPKRLQLLSDITGAFRPGILT
ALMGASGAGKTTLMDVLSGRKTLGTIEGEIRIAGYLKVQDTFARISGYCEQTDIHSPQIT
VEESLVYSAWLRLPPEIPAEKKFEFVNEVLETIELDGIKDALVGIPGISGLSTEQRKRLT
IAVELVANPYIIFMDEPTSGLDARAAAVVMRAVKNVAETGRTVVCTIHQPSIDIFEAFEE
LLLMKLGGRIIYFGPVGQFSSKVIEYFESIPGVPKIEDKYNPATWMLEVTSRSAEAELGV
DFAQIYRESTLYKENKQLVEQLSSPISGSKDLHFPSRFPQNGWEQLKACIWKQNLSYWRS
PAYNLIRIFYIFSGSVLFGLLFWQQGKRIENHQDLFNILGSMYSAIIFFGISNCSGVLPR
IAAERAVMYRERFAGMYSSWAYSFAQVLVEVPYLLAQAIIYVTITHTMIGYSLSPYKIFW
SVYGMFCTLLSFNYLGMLLISVTPDIQLASALTSPFYTMLHLFSGFFVPRTYIPKWWIWL
YYISPTSWQLNGLFTSQYGDLEKEITVFGQTKSVAAFLQDYFGFHRNFLSVVAVVLIIFP
IIFASLFAYFIGRLNFQKR
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccagatgagtagcactgttaagatagagtacttacaggatattgagttaaca
gagtctggtagaagcaccgtatcctcagcaagtgggagccaagtgccaagttttcatggt
gtttcaattgggaattctgatcattatgttagcaatggggttgtcgagaatgacttgcaa
caaagggataccattgagagattaccaacctttgaacggattactactgctttactggat
gaagttgacgatggcaaaacaggaaataaacaagcagatgttaaaggtaaaagaatagtt
aatgttgcaaagcttggagctcaagaccggcatatgttgattgagaagctcatcaagcat
attgaaaatgataatctccaattgctgcagaagcttagagaaagacttgaccaggttggt
gtagagtttcccacggtggaagtgagatacagaagtctctgtgttgaagcagaatgtgag
gtggttcatggcaagcctctccctactctttggagcactgccaagggcatgctttctggg
attgccaatctgtcttgtttgagacaaagagccaagataagcatactaaaagatgtcaga
ggcatcattaagccaagaacgatgactttactgcttggccctccagggtgtggcaaaacc
acattgttgttggcgctcgctgggaaactgagccattccctcgaactttcaggggaatta
tcttacaatggttatggattgggagagtttgttcctcagaaaacttcagcttatgtaagc
caatatgatctgcacattccagagatgacagtgagggaaacaattgatttttctgcatgt
tgtcagggcataggaagccgagcagaaatcttgatggaagtcattagaagggagaagcaa
gcagggatacacccagactctgatgtggatacttacatgaagggaatatcagtcgaagga
ctaaaaagtacccttcaaacagactatattttgaagattctaggacttgatatttgttct
gatacaatgattggggatgctatgagaagaggtatctcaggtggtcagaagaaaaggctg
actacaggggaaatgattgtcggtcccacaaaagcattattcatggatgaaatatcaaat
ggcttagacagttccaccacttcccagattgtatcttgtctgcagcagatggcacatgtt
actcatgatactgtattgatttcgcttctgcagccagcaccagagacctttgatctcttt
gatgacgtcattttgatggctgaaggaaagattgtttatcatggtccacgttctagtatt
tgcaaattttttgaggactgtggatttaggtgtcctgaaagaaaaggtgtcgctgatttt
cttcaggaggtcatctctaggaaagatcaagcacaatattggtactgcaaagagcagcct
tacagttacgtttccattgacgagtacgttaagaaattcaaagaaagtgaatttggacag
aagcttgatgaggagctctcaaagccatttgctaagtctgaaagccacaagactgcttta
tccttcgaaaagtattcattaccaaaatgggaattgtttaaagtttgcagtacgagggaa
tttcttttaatgaaaaggaattattttatttacgtattcaaatctgtgctgctagtgttc
attgcttcggttacaatgactgttttactgcgcacaagaatggctgttgatccaatccat
gcaaattattacatgggagctttattctatgccctcataattatactagtcgatggactt
ccagaattgctgatgactgtctcaaggcttgcagttttcaataaacaaagagagttatgc
ttttaccctgcttgggcttatgcgatccctgctgctatccttaaagttccactttcattc
ttagaagcctttgtttggacaactcttacttactatgtcattggttacagccctgaggtt
tcaaggtttttccgccagttccttctgttctttttggtacacctaacatctacatcaatg
tatcgttttattgcctcaatcttccaaaccgtagttgcctcaacactagctggcagtctc
attgtattgattgttttactatttggtggatttttaatccaaaaaccctctatgcctgct
tggctggaatggggattttggttttctccattgacatatggggagatcggcctgactgtg
aatgagtttcttgcccctagatggggaaaggttgtgtctgctaatgcaaccatagggcaa
cggatactagaaagccgtggattaaactttcacagttacttttattggatatcagttggt
gccctaattggatttactgtacttttcaacgttggttttactttggctttaaccttcttg
aaatctccgggtaaaactcgtgctattatttcttacgaaaagtacaatcgactgcaagga
aaaatagatggtggtgtttgtgttggcaaaaacaagacaccgaccagtgcttgttctaaa
tctagtacaggacctaacaaagggaggctggttttaccctttgagctccttacgtttaca
tttaaagatgttcagtactatgttgatacccctttggaaatgagaaagcgaggttttttg
ccaaagaggctccagcttctttctgacattacaggtgcattcaggcccggtattcttaca
gcactgatgggtgctagtggagctgggaaaacgactcttatggatgttctctccggaagg
aaaactcttggtactattgaaggagagataagaatcgctgggtacctgaaggttcaggat
acatttgctaggatatcaggctattgtgagcaaactgacatacattcaccgcaaattact
gtagaagaatctttggtttattctgcttggttgcggcttccacctgagatccctgcggaa
aaaaaattcgagtttgtaaatgaagtccttgaaaccattgagctcgatgggattaaggat
gctttagtaggaatccccggaattagtggtttatctaccgagcagcgtaaacgactgact
atagctgtagaacttgttgccaatccatatatcatatttatggatgaaccaacttccgga
ttagatgcaagagcagcagcagttgttatgagagcagtgaagaacgtagctgaaacagga
agaacagtcgtttgcaccattcaccagccaagcattgatatttttgaggcatttgaagag
ctgcttctaatgaaacttggaggacgcattatctattttgggccagtaggtcaattctca
agcaaagtgatcgaatattttgagagtattcctggggtgcctaagattgaagacaagtat
aatccagcaacatggatgttagaggttacttctagatctgcagaggctgaacttggtgta
gattttgcacaaatttatcgagagtccaccttgtacaaggagaacaaacagctagttgag
caattgagttcaccaatctccggttcaaaggacttgcattttcccagccgatttccacag
aatggttgggagcagctcaaagcatgcatttggaaacagaacctgtcatattggagaagt
cctgcatataatctcatacgcattttttatattttttcgggatctgttctatttggtcta
ctgttctggcagcaaggaaaacgaatagaaaaccatcaagacctgtttaatatacttggt
tccatgtactctgcaataatcttcttcggtataagcaattgctcaggagtcctgccacgc
attgcagcagagcgggctgtcatgtacagggaaagatttgcaggaatgtactcttcatgg
gcctattcatttgcacaggtgctagtcgaggttccgtacttgctcgctcaagcaattatt
tatgtgaccataacacatacaatgatcggctattccttgtctccctataagatattctgg
tctgtctatgggatgttctgtacattgctttccttcaactaccttggaatgctgctcata
tcagtgacaccagacattcaactggcttcagctttaacctcacctttttacacaatgctg
catctattttccgggttctttgtcccgagaacttatattccaaagtggtggatttggttg
tactatattagtcccacatcctggcaactgaatggtttgttcacttcacaatatggagat
ctggagaaagaaataacagtatttggccagactaaaagtgttgctgcttttttacaagat
tacttcggttttcaccgcaacttcttgagtgttgttgctgtcgtccttataatctttccc
attatctttgcttctctttttgcttatttcattggaaggctgaacttccagaaaaggtga
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