KEGG   Populus trichocarpa (black cottonwood): 7471105
Entry
7471105           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7471105
  KO
K11797  PH-interacting protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7471105
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     7471105
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_RIG_2nd Bromodomain Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 VPS8_N WDR90_beta-prop_4th WD_LRWD1
Other DBs
NCBI-GeneID: 7471105
NCBI-ProteinID: XP_052311016
LinkDB
Position
8:6746790..6762126
AA seq 1729 aa
MALRKYIPSSDAPSGSMKPLIFSSKGRENAQLAEPETSHRRVKDVDVDLSEVYFLIMHFL
SAGPCQRTYVQFWNELLEHQLLPRRYHAWYSRRERLSGDENDNGLSFPLSYKSLEERYPH
IEKNHLVKLLKQLLLNTASPSEGLISDVPNAADVPTLLGMGSFSLLSCDRVKGNGQVKHP
PAHMRWPHRHADQVRGLSLREIGGGFARHHRAPSIRATCYAIAKPLTMVQKMQNVKRVRG
HRNAVYCAIFDRSGRYVVTGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVNSNNTLVA
SSSNDCIIRVWRLPDGMPISVLRGHSAAVTSIAFSPRPGSAYQLLSSSDDGTCRIWDARS
SNLGARIYVPRPPDPVAGKNSGPSSSSGPQSHQIFCCAFNAHGNVFVTGSSDHLARVWNA
LKSNTDDSDQPNHEIDALPGHENDVNYVQFSGCVVPSRFSMADSSKEENIPKFKNSWYSQ
DSIVTCSRDGSAIIWIPKSRRSHGKAGRWIRHYHLKVPPPPMPPQPPRGGPRQRILPTPR
GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTQSTYVLDVHPFNPRIAMSA
GYDGKTIVWDIWEGTPIRIYEISHFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQK
DAKYDQFFLGDYRPLIQDAHGNVLDQETQLVPFRRNMQDLLCDSGMIPYTEPYQSTYQQR
RLGALGVEWKPSSIRFAAGPDFSLDPDNQMLPLADLDVLVEPLPEFMDAMDWEPENDMQS
DDNDSEYNAPEECSSEAEQGSSNSSSSEDPECTAEDSGAEGGDGFRRSKRRKQKGEIEIM
TSSGRRVKRKNLDECDGNSIRSDRARKSRIGRKVSKKKSSTSKALRPQRAAARNARSLFS
KITGTATDGEDEDGSEGDLSETESGMQDSNIESDESNRSLDNDGNRNLKGKDILEESEDF
AESRELTESHMNTINRRRLVFKLPVRDSIKIVFPESGIHKCDYQVDVVGSSSKAPHEATE
VNGVPTSSQDPGYFSGDAHCGRMDGGRRAQIDHYPLDLSEGYKNGDIRWGGVKARTSKRQ
RLGESISSAAYTGSSACLGEQNENENENSLNRFSKFQEDHGTIPPTLEVQNNVDNEGVIP
VNERNAGPDTSEVVNDVSSGKVHSTFNRCMDFETLPNLGHMANENDNPPDLRESFPSFST
MIRIRSKKILKDSLDNQGNGGCDLSTDKSANMTQYPVKEMLEHDGSSGNTPEYKGDGLEE
SDTRIGEISMPSFDDSVGSRSHPKKMFDVVYRRSKPGRGKINSERDGSIREETSIACNPH
LDSRGDSYEGTIGGSHRLHSMGSKGTHDANIAINDLHLGQGHESDDTCRDTHNGSVSRFQ
LPCEEWGSSSRMTVRLRSTRNRKASCHFHDTSPVDGKRKLHQSAKRASWLMLSMHEEGSR
YIPQQGDELAYLRQGHQEYIDCMKSKEAGPWKTIKGNIRAVEFCKVEALEYAPFAGSGDS
CCKMTLKFIDPTSSAFQRSFKLTLPEMTGFPDFLVEKTRFDAAIQRDWSRRDKCKVWWKN
EGEEDGDWWYGRVLYTKPKSSEFPESPWERCTVQYKSDPKELHHHSPWELFDDGTMFEQP
HIDEETMNKLLFAFAKLERAGQKHQDHYGVEKLRQVSQTSRFTNGFAVPLSLEVIQARLE
NNYYRSLEALKHDFEVMLLNAESYFAKQAELLTKMKRLSNWFTRTLSSL
NT seq 5190 nt   +upstreamnt  +downstreamnt
atggctcttcggaagtacattccttcaagtgatgcaccttctggtagtatgaagcctttg
atcttttcaagtaaggggcgtgagaatgcccaacttgcagagccagagacaagtcacaga
agggtgaaagatgtggatgttgaccttagtgaagtttactttttaatcatgcatttcctt
tcagctgggccatgtcagagaacttatgtacagttttggaatgaacttcttgaacatcaa
cttttacctagaagatatcatgcatggtattcaagacgtgaaaggcttagtggggatgaa
aatgataatggtctatcgtttccattaagttacaaaagtttggaggagcggtatcctcac
attgagaagaatcacttggtaaagcttttgaagcaattgttgctcaatacagcctctcca
tcagaaggcttgatttctgatgttccaaatgctgctgatgttcctactcttctgggaatg
ggttcattttcacttttgagttgtgatagagttaagggaaatggccaagtcaagcacccc
cctgctcacatgcgatggcctcatagacatgctgatcaggttcgtgggttaagtttgagg
gaaattgggggtggttttgcaagacaccatcgtgcaccatctattcgtgcaacatgctac
gctattgcaaaaccattaaccatggttcagaaaatgcaaaatgtcaagagagtacgtgga
catcggaatgctgtctattgtgcaatatttgatcgctcagggagatatgttgtcactggt
tcagacgatcgtcttgtaaaaatctggtccatggaaactgctttttgcttagctagctgt
cgtgggcatgaaggggacattactgacctggctgtaaattcaaataataccttagtggca
tcctcttcaaatgattgcataattcgagtttggcgtttgccagatgggatgccaatatca
gttctgcgtggacattctgcagctgttacttccattgcatttagtccaaggcctggttct
gcataccagcttttgtcgtcttctgatgatggaacatgtaggatttgggatgccaggtct
tccaacttaggtgcacgaatatatgttccaaggccaccggatcctgtggctggaaagaac
agcggtccatcctcaagtagtggtcctcagagccatcaaattttttgttgtgcattcaat
gctcatggaaatgtatttgtcactggtagctctgaccaccttgctagggtgtggaatgct
cttaaatccaacacggatgattcagaccagccaaatcatgagatagatgcgttacctggc
catgagaatgatgtcaactatgttcaatttagtggttgtgtcgtgccatctagattttct
atggctgacagctcaaaggaagagaatattccaaaatttaaaaattcatggtattctcaa
gacagcatagttacctgttctcgagatggaagtgcaattatttggattccaaaatcacgt
agatctcatgggaaagctggccgttggatacgacattatcacctgaaagttcctcctcca
ccaatgcctcctcaacctccacgaggaggtccacgacagagaattcttccaactcctcgt
ggggtgaacatgatcgtgtggagtctggataatcgttttgtccttgctgctattatggat
tgcagaatatgtgtttggaatgctgctgatggtagtttggtgcattctttgactggtcat
actcaatctacatatgttcttgatgttcatcctttcaacccaagaatagctatgagcgct
ggctatgatggaaaaacaatagtgtgggatatttgggagggcacacccatccggatctat
gaaatttcacatttcaagttggtagatggaaagttttcaccggacggtacatccattata
ctttcagatgatgttggtcagctgtacatattaaatacaggccaaggcgagtcccaaaag
gatgctaaatatgatcagttcttccttggtgattatcggcctctgatacaagatgcccac
ggaaatgtacttgaccaggaaactcaactagtaccgttccgacggaatatgcaagatctc
ctttgtgactcagggatgattccctatacagaaccttaccaaagcacgtatcagcagaga
cgattaggagctttgggtgtggagtggaagccatcttctataagatttgctgctgggcca
gacttcagtctagacccagataaccaaatgctccccttggctgacttggatgtattggtt
gagccactgcctgagtttatggatgccatggattgggaaccagaaaatgacatgcaaagt
gatgacaatgattcagagtacaatgcccctgaagagtgttcttctgaggcggagcaagga
agttcaaattctagttcatctgaagatccagaatgtactgcagaagacagtggggctgag
ggcggggatggtttccgaaggtctaaaaggagaaaacaaaagggtgaaattgagataatg
acttcttctgggaggcgtgttaagaggaagaatttggatgagtgtgatggaaattcaatt
agaagtgatcgagctaggaaatcaaggattggccggaaagtttcaaagaagaagtcttcc
acttcaaaggccttgagacctcaaagagctgctgcccgcaatgcgcgtagtttgttttca
aaaattactggaacagctacagatggagaagatgaagatggttcggaaggtgacttatca
gaaactgaatctggcatgcaagactcaaatattgaaagtgatgaatcaaatagatctttg
gacaacgacgggaacaggaatttgaagggaaaagatatcctggaagagtctgaagacttt
gctgaatcacgtgaacttactgaatctcacatgaatactataaataggaggagattggtc
tttaaattgccagttcgcgattctattaagattgtattcccagaaagtggaatacacaag
tgtgactaccaggttgatgtggttggatcatcgtccaaagctcctcatgaagccaccgag
gtcaatggggttcctacaagctctcaagatccgggatacttttctggtgatgcacattgc
ggcagaatggatggaggaagaagagcacagatagaccattatcctttggacctgtctgaa
ggatacaaaaatggggatatcagatggggaggtgtaaaggctcgtacttctaagcgtcag
agattaggagaatccatttcatcagcagcatatactggatctagtgcatgccttggtgaa
caaaatgaaaatgaaaatgaaaatagtctcaacagattctcaaaatttcaggaagatcat
ggcacaataccccctactttagaagttcaaaataatgtggacaatgaaggagtcatacca
gtgaatgaaagaaatgctgggcccgatacctcagaggttgtaaatgatgtgtccagtggt
aaagtgcactcaaccttcaacagatgcatggattttgaaacattaccaaacctgggtcac
atggctaatgagaatgacaaccctcctgatctcagagagagcttcccatctttctcaaca
atgataaggataagatcaaaaaagatattgaaggattcactagataatcagggaaatggt
gggtgtgatttatcaactgataagtctgcaaacatgacacagtatccagtaaaggagatg
ctggagcatgatggttccagtggaaatactccagaatataaaggtgacggattggaagaa
tcggatacacgaattggtgaaatttccatgccatccttcgatgactcagttgggtctcgt
tcacatcccaaaaagatgtttgatgttgtttatagaaggtcaaagccaggcagaggtaaa
attaactcagaacgtgatggcagcatcagagaagaaacttcaattgcttgtaaccctcat
cttgactccagaggggattcctatgaaggcacaattggtggatctcatagattacattcc
atgggctcaaagggaacacatgatgcaaatattgcaatcaatgatctccatttggggcag
ggacatgaatcagatgatacttgtagagatacccacaatggttctgttagtagatttcag
cttccatgtgaagaatggggatcaagctcaaggatgacagttcgattgagatctactaga
aacaggaaagccagttgtcactttcatgacacaagtccagtagatggaaagaggaagttg
catcagtcagccaaaagagcgtcatggttaatgttgtcaatgcatgaggagggctctcgt
tacatcccccaacagggggatgaattagcatacttgagacagggccatcaagagtacata
gactgcatgaagtcaaaagaagcaggcccttggaagacaatcaagggaaacataagggca
gttgaattctgtaaggttgaagccctcgagtatgctccatttgcaggatctggggatagt
tgctgcaaaatgacgcttaaatttatagatcctacttccagtgcatttcagagatcattc
aaattaactctacctgaaatgactggcttcccagattttcttgttgaaaaaactcggttt
gatgctgccatacagagggattggagtcgcagggataaatgtaaggtctggtggaaaaat
gagggtgaagaagatggtgattggtggtatggccgggttttatatacaaagcccaaatct
tctgaatttcctgagagtccatgggagaggtgtactgttcagtataagagtgatcccaaa
gaactgcatcatcacagtccgtgggagctttttgatgatggtaccatgtttgagcagcct
catatagatgaggagactatgaacaagttgctgtttgccttcgccaaactagagcgagca
ggccaaaaacaccaggatcactatggggttgaaaagctaaggcaagtttcgcagacgtct
cgttttactaacgggttcgcagttccattgtctcttgaagtgatccaggcaaggttagaa
aacaactactatagaagcttggaggcattgaagcatgactttgaagtcatgttgttgaat
gcagaatcatactttgcgaagcaggcagagctcttgacgaaaatgaaacgtttatcaaac
tggttcacacggacattatcatctttgtaa

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