Populus trichocarpa (black cottonwood): 7471176
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Entry
7471176 CDS
T01077
Name
(RefSeq) U-box domain-containing protein 9
KO
K27971
U-box domain-containing protein 9 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7471176
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7471176
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
U-box type E3
7471176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
Arm
ARM_ARMC5
ARMC9_ARM
HEAT_2
TPR_Trm732_C
zf-Nse
zf-RING_UBOX
HEAT
KAP
Motif
Other DBs
NCBI-GeneID:
7471176
NCBI-ProteinID:
XP_002301810
LinkDB
All DBs
Position
2:23904501..23907233
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AA seq
456 aa
AA seq
DB search
MAKTGVFKSDPMVMTKAMELKKELQKLVRNIVDDEDYRTELIDQARETLFALKGLKVKRR
SSSLKLRETVLCPEEFKCPLSKELMRDPVVLATGQTYDRPFIQKWLKAGNRTCPLTQQVL
SHTILTPNLLIREMISQWCKSQGLELPDLSQNVNEEGITEADRDHFLSLLEKMSLTLPEQ
KDAARELRLLTKRMPSFRALFSESLEAIPQLLRPLSEGKSGSSMYPNLQEDIITTLLNLS
IHDNNKKLVAETPMVIPLLMEALRSGSIETRTNAAAALFTLSALDSNKTLIGKSGALKPL
IDLLEEGHPSAMKDVASAIFNLCIIHENKARAVRDGALKVILTKIMNGMHVDELLAILAV
LASHQKVVEELGDSGAVPCLLRIIRESTCDRNKENCIAILHTICLNDRTKWKVMRDEESS
YGTISKLARHGTSRAKRKANGILERLNRAVNLTHTA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacaggggtctttaaatccgatccgatggtgatgactaaggcgatggaatta
aagaaagaactgcagaagctagtgaggaacattgtggatgatgaggattaccggacggaa
ttgattgatcaagcaagagagactctttttgctttgaagggactgaaggtgaagaggaga
tcatcgtcgttgaagctgcgtgaaacagtgttgtgccctgaagagtttaagtgcccttta
tccaaggaattgatgagagatcctgtggttttggctacaggccagacgtatgatagaccc
ttcatccagaaatggctgaaagcaggcaatcggacgtgccctctaacgcaacaagtactg
tcgcacacaattctcactcctaatctgttgataagggaaatgatatcgcagtggtgtaag
agtcaggggttagaattgccagacctttctcaaaatgttaacgaggaaggaataacagaa
gcagatcgcgaccattttctgtctttgcttgaaaaaatgtctctaacacttcctgaacaa
aaagatgcagcaagggagctgaggctgttgacaaagaggatgccttcattccgggcgtta
tttagcgagtcacttgaggccattcctcaattgctcagaccactctctgagggtaagtct
ggaagttcgatgtaccctaatctccaagaagatatcatcaccaccctgttgaacctttcg
atccacgacaataacaagaagcttgttgctgaaacccccatggtaattcctcttcttatg
gaagcattaaggtctggaagtattgagacgaggactaatgcagctgctgcccttttcaca
ctctctgctctagattccaacaagacactgatcggcaaatcaggtgccctgaaaccactt
attgaccttttagaggagggacatccttcagctatgaaagatgttgcttctgcaattttt
aacctgtgtattatccatgaaaacaaggcgagagctgtgagggatggtgcattaaaggtg
attctgacgaagatcatgaatggtatgcatgttgatgagttattggctatcctcgctgtg
cttgctagtcatcaaaaggtggtcgaggaactgggagactctggagctgttccttgcctg
cttcgcattatcagggagagcacctgtgaccgcaacaaggaaaattgcatcgccattctc
cataccatctgtttgaacgaccgaaccaagtggaaagtaatgagggacgaggagagttct
tacggaacaatttctaaactggctcgacatggcacttcaagggccaagaggaaagctaat
ggcatcctcgagagactgaatagggctgtcaatctgactcatacagcataa
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