Populus trichocarpa (black cottonwood): 7471448
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Entry
7471448 CDS
T01077
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5
KO
K25871
zinc finger protein IDD14/15/16
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7471448
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7471448
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
zf-met
zf-MYST
zf-H2C2_2
DUF2524
FAM92
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
7471448
NCBI-ProteinID:
XP_024461730
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Position
8:9450922..9453679
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AA seq
424 aa
AA seq
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MLDSTTTSTAPSPSSDPFTTSLDNGVTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVC
EICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPCHALGDLVG
IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
DACTVRGAQPELQALQPACSSRTASSTSPSSDANFNIAPLPGIPMSKPTEQVYLCSDRND
ASTSSQQEHNLELQLLPSSSNHLPQNPDEPHAANLKLSIGSSDHSCEKDGSNKAIGDPSW
HKSTSNEPAFEAAKLKEFTNEQLRLAMTEKAYAEEARQQAKRQIEMAELEFANAKRIRQQ
AQSELEKAQLLKEQATKKLSSTIMQVTCQVCKQQFHASTAAAPADETSLAMSYMSSATTE
GDGE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacagcaccaccacttcaactgctccatctccttcctctgatcccttcacaact
tccttggataatggggtcaccaataaaagaaaaagaaaacctgcaggcacaccagatcca
gatgcagaggttgtatctctatcgcccaggaccctactagaatcagacagatatgtctgt
gagatctgcaaccaagggtttcaaagagaccagaaccttcaaatgcacaggagaaggcac
aaggtgccatggaagctactgaaaagggagacacaagaagtgaagaagagagtttatgta
tgcccagagccaagctgcttacatcatgacccttgccatgctttaggagatcttgttggc
ataaagaagcattttagaaggaagcatagtaatcacaagcagtgggtttgtgagaagtgt
tctaagggttacgcggttcagtctgattacaaagctcacctcaagacttgtggcacaaga
ggtcattcttgtgactgtggccgtgtcttttccagggtggagagtttcattgagcaccaa
gatgcttgcacagtaaggggagcccagcctgaactacaggcattgcagccggcctgctca
tctagaactgcttcaagcaccagcccttcaagtgatgccaattttaacatagcaccctta
ccagggataccaatgtcaaagccaaccgaacaagtttacttgtgctcggatagaaatgat
gcgtctacttctagtcagcaagaacataatcttgaacttcagctcttaccatcttcaagc
aatcacttaccacaaaaccctgacgagcctcatgctgcgaatttgaagctttcaataggg
tcaagtgatcatagttgcgaaaaggatggatcaaacaaggccattggggatccgagttgg
cataaaagcacctctaatgagcctgcattcgaagcagcaaagttaaaggagtttacaaat
gaacagttgaggttggctatgactgaaaaggcctatgccgaggaggctagacaacaagca
aagaggcaaattgagatggctgaactggaatttgcaaatgcaaagaggattaggcaacaa
gctcaatctgaacttgaaaaggctcaacttttgaaagagcaagctacaaagaaattaagt
tctaccattatgcaagtcacctgccaagtttgcaagcaacaattccacgcatcaactgct
gctgcaccggcagacgagacttctcttgctatgagttacatgtcctcagcaactactgaa
ggagatggagaatga
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