Populus trichocarpa (black cottonwood): 7471571
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Entry
7471571 CDS
T01077
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00730
Thiamine metabolism
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
7471571
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7471571
Enzymes [BR:
pop01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
7471571
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
7471571
NCBI-ProteinID:
XP_024460342
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All DBs
Position
6:24909277..24915556
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AA seq
715 aa
AA seq
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MGTSVTQYPYGITSPSYVEFGHKLEISSSNFPYKVELSRLNLYPSSVSTTNSKVRVRRIC
ALPDIDDIFSDLIATPLLDVVENPIHLKNLTIKELKLLASEIRSELSSIMSKTQNDFKAS
LAVVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKDGLSGFTSRSES
EYDPFGAGHGCNSISAGIGMAIARDIKGKRERIVTVIGNGTTMAGQVYEAMGNAGYLDTN
MIVILNDSRHSLHPKIEEGSKTSITALSSTLSKLQSSKSFRRLREVAKGVTKRIGMHELA
AKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIGELVCVLQEVSSLDSMGPVLIHVIT
EENQCTEYKQPSEAMENQQEGSFDSNELLYSMHARTYSDCFVEALIMEAEKDKDIVIVHA
GMEMDPSFQLFRERFPDRFFDLGMAEQHAVTFSAGLSCGGLKPFCIIPSAFMQRAYDQVV
HDVDRQRIPVRFVITSAGLVGSDGPTMCGAFDITFMSCLPNMIVMAPSDEDELVDMVATA
VHSDDHPICFRYPRGAIVGTDHYTRSGIPIEIGKGKILIEGKDVALLGYGEMVQNCLRAR
ALLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSIGGFGSHVSQFIALDGQ
LDGRTKWRPIVLPDKYIEHALPKEQLALAGLTGHHIAATVLRLLGRTREALLLMC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttctgttactcagtacccatatggaattacttcaccttcttatgtagaattt
ggtcacaaattggagatttcaagctctaattttccttacaaggtggaattatcaagatta
aacttgtatcctagttctgtttccaccacaaactccaaggtgcgtgttagacgaatatgt
gctctacctgatatcgatgatatattttctgatcttattgcgacaccattacttgatgtg
gttgaaaatcctatccacttgaagaatttaaccattaaggaactgaaactattagctagt
gaaatacgatcagagttgtcttccataatgtcaaagacacaaaatgactttaaggccagt
ttggcagtggttgaactgacagttgcaatacaccatgtttttcatgctccagtggacaag
atactgtgggatgttggggaacaaacatatgcacataaaattctcactggaaggagatct
cttatgcatacgctaagacaaaaggatggtctttctggatttacatcccggtctgagagt
gaatatgacccgtttggagcaggacatggatgcaacagtatttctgctggaatcggcatg
gcaattgctcgtgatattaaagggaagcgggaacgtattgttacagtcattggcaatggc
acaaccatggctggtcaggtctatgaagcaatgggtaatgcaggctatttggacacaaat
atgattgtgattttaaatgacagccgacactctttacaccccaagattgaagagggctcc
aagacttcaatcactgccctttctagtaccctaagcaagctccagtcaagtaaatcattc
cggaggctcagagaagttgcaaagggtgttaccaagaggataggtatgcatgaattagca
gctaaagttgatgagtatgcacgtggtatgatgggtcctctgggatcaactctcttcgaa
gaacttggattgtactacataggccctgttgatgggcacaatattggagaattggtttgt
gttttacaagaagtgtcatctctggattcaatgggtcctgtcttgatacatgtaataact
gaagaaaatcagtgtacagaatataaacaacctagtgaggcaatggagaaccagcaggaa
ggttcatttgattccaatgaattactatatagtatgcatgctcgaacatacagtgattgc
tttgttgaggctctgatcatggaagcagagaaagacaaagatattgtgattgttcatgca
ggaatggaaatggatccatcatttcaactatttcgggaaagatttccagacaggtttttt
gacttgggaatggctgagcaacatgcagttacattttcagctggcttgtcatgcgggggg
ctaaagccattttgcataattccttctgcttttatgcagagagcttatgatcaggtggtc
catgatgtagataggcagaggattccagttcgttttgttattacaagtgcgggactggta
ggatctgatggtccaactatgtgtggagcattcgatataacattcatgtcatgcttacca
aacatgatcgttatggcaccatcagacgaggatgagcttgtggacatggtggctactgca
gtccattctgatgatcacccaatttgctttcggtatccaaggggtgccattgttggaact
gatcattatacacgtagtggtattcccattgagattggaaagggaaaaattcttatagag
ggtaaagatgttgctttgcttgggtatggggaaatggttcagaactgcctcagagctcgg
gcccttctttcgaaacttggcattgaggtaactgttgctgatgcaagattttgcaaacca
ctggacatgaagcttctcagacagttgtgtgaaaaccatgcctttctggtcacggttgag
gaaggttctattggaggatttggatcccatgtttcacagttcattgcccttgatggacag
cttgatggaagaactaagtggcgaccaattgttttaccagacaaatacatcgaacatgca
ttgccaaaggaacagctcgctcttgctgggctgactggacatcatatcgctgcaacagtg
ctaagactgcttggtcgcacccgtgaagctctgctcttgatgtgctaa
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