KEGG   Populus trichocarpa (black cottonwood): 7471592
Entry
7471592           CDS       T01077                                 
Name
(RefSeq) EIN3-binding F-box protein 1
  KO
K14515  EIN3-binding F-box protein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04016  MAPK signaling pathway - plant
pop04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    7471592
   04075 Plant hormone signal transduction
    7471592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7471592
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     7471592
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box F-box-like LRR_RPS2
Other DBs
NCBI-GeneID: 7471592
NCBI-ProteinID: XP_002308665
LinkDB
Position
6:25195929..25199897
AA seq 646 aa
MSKVFGFAGENDFCPGGPIYTNHKEQNLFLSIGRPVDVYFPSRKRSRISAPFVFTEERFE
QKKQASIEFLPDECLFEIFRRLPGGDERGACACVSKRWLSLLSNICKDELCSQNESAKKN
TQVKSEVEDEEIEGDGYLSRSLEGKKATDIRLAAIAVGTASRGGLGKLFIRGSNSSQGVT
KVGLRAIARGCPSLKVLSLWNLPSVGDEGLSEIANGCHKLEKLDLSQCPAITDKGLLAIA
KSCPNLTDLVIESCTNIGNEGLQAVGQHCTNLKSISIKNCPAIGDQGIAALVSSATNVLT
KVKLQALNITDVSLAVVGHYGKAVTDLFLTSLSNVSERGFWVMGNGQGLQKLKSMTVASC
VGLTDTGLEAVGKGCPNLKQFNLHKCSFLSDNGLVSFAKSAVSLESLLLEECHRITQFGF
FGSLLNCGANLKAASLVNCFGIKDLKLDLPELSPCKSLRSLSIRNCPGFGDGSLALLGKL
CPQLQNVELSGLQGVTDAGFLPVLENCEAGLVKVNLSGCVNLSDKVVSVMTEQHGWTLEV
LNLDGCRRITDASLVAIAENCFLLSDLDVSKCATTDSGIAAMARSNQLNLQVLSMSGCSM
ISDKSLLALIKLGRTLLGLNLQHCNAISSSTVDVLVERLWRCDILS
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtctaaggtctttggatttgctggtgaaaatgatttttgccctggggggccaatttac
acaaaccataaggagcagaacctctttttgtctatcggccgtcctgtggacgtgtacttt
ccttcacgcaagaggtctcgcatcagtgctccatttgtcttcactgaagagagattcgag
cagaaaaagcaagcttctattgaatttttgccagatgaatgcctctttgaaatcttcaga
cgtttgcctggaggcgatgagagaggtgcctgtgcatgtgtttcaaagcgttggcttagt
cttctaagcaatatctgcaaggatgagctttgcagccagaacgaatcagctaaaaagaac
actcaagtgaaaagtgaggttgaagatgaggaaatcgagggtgatggatatctgtccagg
agcctggaggggaaaaaggccacagatattagacttgcagccattgctgttggaactgct
agtcggggaggattgggcaagctttttatccgtggaagcaattccagtcaaggagtgaca
aaggtaggcctgagagcaattgctcgtggatgcccatctctgaaggttctttccctgtgg
aatttgccgtctgttggggatgaaggtctatcagagattgcaaatggctgtcacaagctg
gagaagctagatctttcccaatgccctgcaattactgacaagggtttgcttgcaatcgca
aagagctgccccaatctgactgatctagtgatagaatcttgcacaaacattggtaatgaa
ggtctgcaagctgttggccaacattgcaccaatctgaagtccatttcaattaaaaactgc
ccagctattggggatcaaggaattgcagccctagtatcttccgccacaaatgttttgaca
aaggtgaagctccaagctttgaacatcactgatgtgtccctggctgttgttggacactat
ggcaaggcagtaactgatctttttctgacaagcctctcaaatgtcagcgagaggggtttt
tgggtcatgggtaatggccaagggttgcagaagttgaagtccatgacagttgcatcctgt
gtgggattgacagatactggacttgaagctgtgggaaagggttgcccaaatttgaaacag
ttcaacctccacaagtgttccttcttatctgacaatggactcgtctcatttgcaaaatct
gcagtgtcactcgagagcctgcttttagaggagtgccacaggatcacccaatttgggttt
tttggttcccttttaaactgtggtgcaaatctgaaggctgcttctctcgtgaactgcttt
gggattaaggacttaaagctagacttgcctgagctgtctccttgcaaatccctgcgatca
ttgtccatccgcaactgccctggttttggtgatggtagtcttgctttgttgggtaagttg
tgcccgcaactgcagaatgtggaattgagtgggcttcagggagtaactgatgctgggttt
ctcccagtgcttgagaactgtgaggctggcctggtgaaggttaacctcagtggttgtgtc
aatttgtccgacaaagtggtgtcagtgatgactgagcagcatggttggactcttgaagtg
ctaaatcttgatggatgcaggaggataaccgatgcaagtttggtggcaatagcagaaaac
tgtttcttgctatctgaccttgatgtctcaaagtgtgcaaccactgattctggtattgca
gccatggctcgctcaaaccagctcaatctgcaggtcctctctatgtcaggttgctctatg
atatcagataagagcttacttgccctcataaaactgggccggaccctcttggggttgaat
ctccagcactgcaatgctattagcagcagcactgttgatgtgcttgtggagaggttatgg
aggtgcgatattctttcctaa

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