Populus trichocarpa (black cottonwood): 7471602
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Entry
7471602 CDS
T01077
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 6 isoform X1
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7471602
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
7471602
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAR1
MULE
ZSWIM1-3_RNaseH-like
SWIM
DUF5575_N
Motif
Other DBs
NCBI-GeneID:
7471602
NCBI-ProteinID:
XP_002309639
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Position
6:complement(25359363..25362265)
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AA seq
670 aa
AA seq
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MEEVCLNSEPVFDEGDDYEVEGDSSAVGCDDETGENCSKKERPEPTVGLEFDSFDEAYDF
YNVYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMVV
IRLVDSKRWRIVDVELEHNHPVNPQIKRFYKSHKRMILAAKKAQPPPEPVTEVHTIRLHR
RALMNTGCNVYLNVDERGHVDHVDHFKHLELKEGDALAVYNYFCRMKLTNPNFFYLMDLD
DEGRLRNVFWADARSRVAYGFFCDTVTIDTTCLANRYEIPLISFVGVNHHGQSVLLGCGF
LGHESMEYFVWIFRAWIKCMQGHLPQVIITDQNKPLQSAVSEVFPNARHCYNVCCITQRV
PERLGGLQGYEAIKRQLNKAVYNSLKIAEFETSWADMIKCHGLGDNKWLQTLYKERQAWV
PVYLKDIFFVGMIPIQEDESLNAFFDGYVHKHTSFKEFVDKYDLALHRKHMKEAMADLES
TNSSYELKTRCNFEVQLSKVYTKEIFRKFQSEVEGMYSCFNTKQLRVNGQIATYIVKERV
EVAGSEKEVRHFEVLYDTSQADIRCICCLFNYKGYLCRHALNVLNYNGVEEVPSRYILPR
WGKDYKRRGLLDHNSGDVDVDNPIYWHNLLYRYAIPVVEVGAESSDHYKIALQELEELLN
KFNLAEDNLV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtttgtttgaatagtgagccggtgtttgacgaaggcgatgactatgaagtt
gagggagacagcagtgcagtgggatgtgatgatgaaactggtgaaaattgttcgaagaaa
gaacgaccagaaccgaccgtgggtttggagtttgattcttttgatgaagcttatgatttt
tacaatgtttatgccaaggaacaaggttttggcattagagtgagcaactcttggttcagg
tcaaagagaaaagaacgttatagagcgaaacttagttgcagtagtgcaggttttaagaaa
aagagtgaagcaaacaatccaagaccggaaacaagaactggctgtcctgcaatggtcgtc
attaggctagtggactctaaaagatggagaatagttgatgttgagcttgaacataatcat
ccggtgaatcctcaaatcaaaaggttttataagtctcataaacggatgattcttgcagcc
aaaaaagcacaaccaccaccagagcctgtcaccgaagtacacactatcaggttgcatcgt
agagctctcatgaatactgggtgtaatgtgtacttaaatgttgatgaaagggggcatgtt
gatcatgttgatcacttcaaacatttggaactcaaagaaggagatgcacttgcagtatat
aactacttctgtcgcatgaagttgacaaatcctaacttcttttacttaatggatctcgat
gacgaggggcgcctgaggaatgtgttttgggctgatgctaggtccagggttgcatatggt
ttcttttgtgacacggtaacaattgacacaacatgcctggcaaacaggtatgagatacct
cttatttcatttgttggtgtgaaccaccatggacaatctgtgttactgggatgtggcttc
cttggacacgagtctatggaatattttgtctggattttcagggcatggatcaagtgcatg
caagggcatcttccacaggttatcattactgaccaaaacaaacccttgcaaagtgcagta
tctgaggttttcccaaatgctcgtcattgttacaatgtgtgttgtatcacccagagagtt
ccagagaggttgggagggttgcagggatatgaagccatcaaaagacaattaaataaagct
gtctataattccctaaagatagctgagtttgaaacttcttgggctgacatgatcaagtgc
catggtcttggtgataataaatggcttcaaacgttgtataaagaaagacaagcgtgggtt
ccagtctacttaaaggacatattttttgtgggaatgatccccatccaagaagatgagagc
ttgaatgccttttttgatggttatgtacataagcatacatcgtttaaggaatttgtagat
aagtatgatctcgccctacaccgtaaacacatgaaagaagccatggcagatctggagtcc
acaaattcaagctacgagttgaaaacaagatgcaactttgaggtgcagctctccaaagtg
tatacaaaagaaatctttagaaagttccagtctgaagttgaggggatgtattcttgtttt
aacacaaaacagctgagagttaatggacaaatagcaacatacatagtcaaagaacgagtt
gaagttgcaggaagtgagaaggaggttaggcattttgaagttttatatgatacaagtcaa
gcagatatccgatgcatatgctgtttgttcaattacaaaggttatctatgtaggcacgcc
ttgaacgtgcttaattataatggtgtggaagaagtcccttctcgctacattctgccacgt
tggggcaaagattataagcgcaggggtcttctagatcacaattccggtgacgttgatgtg
gataacccaatttactggcataatcttctgtataggtatgccattccagttgtggaagta
ggagcagagtcttcagatcattataagattgcattgcaagaactggaagagttgttgaac
aaattcaatcttgcagaggacaacttggtgtaa
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