Populus trichocarpa (black cottonwood): 7471608
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Entry
7471608 CDS
T01077
Name
(RefSeq) pumilio homolog 23 isoform X1
KO
K14790
nucleolar protein 9
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7471608
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
Other 90S particles
7471608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
7471608
NCBI-ProteinID:
XP_052307554
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All DBs
Position
3:10082930..10091193
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AA seq
765 aa
AA seq
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MVSVGSKALASRRDRSCCNLVEDNLMGREDKSYNQGRKKKGMSRKAKNGSFGFDADNSNK
SVSGRATDGTAKPKKSSKYQNTFSEPQPSIVRKQVDPETTKYFSEIVNLFESDGVDLEER
PVICGNALEEARGKEFELATDYYISHTLQILLEGCNVDHLCDFLQGCAKVFPLISMDRSG
SHVAETALKSLAMHLQDDEAYSVIEETLTNICKVIVASPVDMMCNCYGSHVFRSLLCLCG
GVPLDSPVFHRAKPSMILAERLNLSTSSAPGNNLSHHHQGFPGLLKFLVSGMLKCSEEDV
KYLLVDQYSSLVFQASLKLFAGHDQQLLQIIPVLLDCRKENLTEGNFIEMTAVGDIVKLM
KEAAYSHLMEVILAVSPESLYDEMFTKIFRKSLFELSSHHCGNFVVQALVSHARDREQME
FIWEKLGPKFRDLLEMGKSGVIASLIATSQRLHTHEHEVCKALADAVCLPNESPRSVVDR
ILFLESYFACVEKSNWKWPSGAKIHVMGSLILQAVFKFQNQLIQPYIMSLTSMEVDHVLE
AAKDVGGARTIEAFLDSDASGKQKHRLINKLRGHFGELAMHSSGSFTVEKCFSASNLSLR
EAIASDLLSVQSELPKTKQGPYLLRKLDIDGYANRPDQWRSRQASKQSTYKEFYAAFGSG
EVKSSKSDSFLADTSKSTSLAIGVKNVRKEIDHHLASSEKYAKHAVVDDVMKVKNKKHEK
GHGGASDEKATVSVNQKPFLSVDLKKNKRHGQEERSKASRKKLKV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgttggttcaaaagctttagcgtcaagaagagacaggagttgttgtaatttg
gtggaagataacttgatgggcagggaggataaatcatataatcagggcagaaagaaaaag
ggtatgagcaggaaggccaagaatggcagttttggttttgatgctgataattccaacaaa
agtgtttctgggcgggcgactgatggaactgcgaaacccaaaaagtcatcaaaatatcaa
aatactttctcagagccacaaccatcaattgtaaggaaacaggttgatcctgaaacaacc
aaatatttttcagagattgtaaatctttttgaaagtgacggcgttgatttggaggagcgt
ccggtcatatgtggcaatgctcttgaagaagctagaggcaaagaatttgagctggcaact
gattattatataagccacactctgcaaatcctacttgagggctgtaatgtggaccatctt
tgcgatttcctccaaggctgtgcaaaggtctttcctttaatttcaatggataggtctggt
tctcatgttgctgagacagctctcaagtctttagctatgcatcttcaggacgatgaggct
tattctgttattgaagagactctaactaatatatgcaaggtaattgtagctagtcctgtt
gatatgatgtgtaactgctatggatctcatgttttccgaagtcttctttgtctttgtgga
ggagtgccattagattccccagtgttccatcgagcaaaaccatcaatgattctggcagag
cgtttgaacctcagcacttcttcagcccctgggaacaatttatcacatcatcatcaagga
tttcctggtttactcaagtttcttgtatcaggaatgttgaaatgtagtgaagaagatgtg
aaataccttctagttgatcagtacagcagtttggttttccaggcatctttgaagttattt
gctgggcatgatcaacagttgttacagataattccggtcctacttgactgcagaaaagaa
aatttaacagaaggaaacttcatagaaatgacagcggtcggtgacattgtaaagttaatg
aaagaagctgcgtatagccacctaatggaggtaatcctggcagtgagtcctgaaagcttg
tatgatgaaatgttcacaaagattttcaggaaatctctatttgagctttcatcccatcat
tgtggcaattttgttgttcaagccttagtttctcatgcaagagatcgcgaacaaatggag
tttatctgggagaaacttggtccaaaatttagggatcttcttgaaatggggaagtcagga
gttattgcatctcttattgctacaagtcaaaggcttcacacacatgaacatgaggtctgt
aaggcccttgctgatgcagtatgtttgccaaatgagtctcctagatctgttgttgatcga
atattgtttcttgaaagttactttgcttgtgtggaaaaatccaattggaagtggccaagt
ggtgccaagatccatgttatgggctctctgattctgcaggcagtttttaaatttcaaaat
caactcatacagccttatataatgagtctcacatccatggaagttgaccatgtccttgaa
gctgcaaaagatgtagggggagctcgtacaatcgaagcatttctagattccgatgcgtct
ggaaaacaaaagcacagactaattaataagttacggggacattttggagagctcgcaatg
cactcgtccggttcatttactgttgaaaagtgctttagtgccagtaatttgtcactaaga
gaagctatagcatcagacttgttatccgtgcaaagtgagcttcccaagaccaagcaaggc
ccttacctcttaagaaaattagatattgatggatatgctaaccggcctgatcagtggaga
tcaagacaggcttcgaaacaatcaacttacaaagaattttatgctgcatttggatctggt
gaggtcaagtcatcaaaaagtgactccttccttgctgatacttccaagagcacatcactc
gcaataggagtaaagaatgtgaggaaagagattgatcatcatttggcctcatcagagaaa
tatgcaaagcacgctgtggttgatgatgtcatgaaagtgaaaaacaagaagcacgagaag
ggtcatggtggtgcctctgatgagaaagcaacagtgagtgtaaatcagaaaccttttctg
tctgttgacctgaagaagaacaaacgacacggacaagaggagcgatcaaaagcttcaaga
aagaagttaaaagtttga
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