Populus trichocarpa (black cottonwood): 7471635
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Entry
7471635 CDS
T01077
Name
(RefSeq) E3 ubiquitin ligase PQT3-like isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7471635
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7471635
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
U-box type E3
7471635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
7471635
NCBI-ProteinID:
XP_002304286
LinkDB
All DBs
Position
3:complement(10582690..10589867)
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AA seq
855 aa
AA seq
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MAVYYKFKSARDYDSIPMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRLPIVTEQEPKLETKVEDTLPEKGSFMGADSSSMRYTEDNE
WDEFGNDLYSIPDVLPVQSSNPPPDVAPTNKADEDDRIKALIDTPALDWQRQGADGFGAG
RGFGRGVAGRMGGRGFGLERKTPPQGYVCHRCKIPGHFIQHCPTNGDPNYDIKRVKPPTG
IPKSMLMATPDGSYALPSGAVAVLKPNEAAFEREIEGLPSTRPVGDLPPELHCPLCKEVM
KDAVLTSKCCFTSFCDKCIRDYIISKSKCVCGVSNVLADDLLPNKTLRDTINRILESGNS
SAENVGSAFQVQDMESARCPPPKIPSPTQSAASKGEHKPSPVNEESPILNKAIAEEEKPL
IASQQVPEKVRTAKAVDVSEATHESISVKEPASQGSAPLAEEEVQQKLAPGEAGKKKKKK
KVRMPPNDLWKASQDLAAESFMMPMGPSAFNPYWSGMQTGMEGYMAPYPGPMPFMGYGLS
PLDMPYGGVMPPDPFGAQSYMMPAVPPQRDLAEFGMNMNLRPPLMSREEFEARKADVRRR
RENERRAEREFSRDWDPGREVSGGGDVSSMKSKSIPQSSASGDPHHNRRRSERLSPERSA
REIDPLPPRPSKRKSDRHEHGDRDADDFDYHERDRSDRDHRHHHRHRSESSSKAVSETTT
KPPSTTVTDRKQKVSVFSRISFPAEGEPTSKKRKVSSSSEAAPAATGGGGPLSSTHHKSS
SPVNNGYYDDYKSSSVKTRKSSSSVAATAAMDYESSDDDRHFKRKPSRYEPSPPPPAEWE
EDVKHSRRDKDRKHR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtattacaaatttaagagtgctagagattatgattcaatcccaatggacggt
ccatttatatccgttggtactttgaaagaaaaaatatttgaatcaaagcatttgggaagg
ggtacagacttcgaccttgttgtcactaatgcccaaaccaatgaagagtatcttgatgaa
gcaatgttaattcccaaaaatacctctgtattaatacgccgggttccagggaggcctcgt
ctgcccattgttacagagcaagagccaaagttggaaactaaggtggaggacacccttcca
gagaagggtagttttatgggtgctgattcatcttccatgagatatactgaagacaatgaa
tgggatgaatttggaaacgatttgtattccattcctgatgtactgcctgttcaatctagt
aatccacctcctgatgtggcccctacaaacaaggctgatgaggacgacagaattaaggca
ttgattgataccccagcattggactggcagcgtcagggtgctgatggctttggtgctggt
agaggttttggtaggggtgtggctggaagaatgggtgggcgtggttttggcttggagcgg
aaaacacctccacaaggctatgtatgccacagatgcaagattcctgggcattttattcaa
cactgccctacaaatggtgaccctaattatgatattaaaagagtaaagccacctactggt
attccaaagtcaatgctgatggctaccccagatggctcatatgctttacctagtggtgca
gttgctgttttgaagccaaatgaggctgcttttgagagagaaattgaaggcctaccttcc
acacggcctgttggtgatcttccacctgaacttcactgcccactgtgcaaggaagttatg
aaagatgcagtcttaacaagcaaatgttgtttcacgagcttctgtgacaagtgtataaga
gattacattatctcaaagtcaaagtgtgtatgtggggtatcaaatgtccttgcagatgat
cttcttcctaacaagactctcagggatacaatcaatcgtattttggagtctggtaacagt
agtgctgaaaatgtaggaagcgcctttcaagttcaagatatggagtctgcacgctgtcca
cctccaaagattccatcacccacacagtctgctgcatctaagggagaacataagccgtct
cctgttaatgaagaatctccaattttaaacaaggcaatagctgaggaggagaagcctctt
attgcttctcagcaagtccctgagaaagtgaggactgctaaagctgtggatgtatctgag
gctactcatgagtcaataagtgtgaaggagccagcttcgcaaggaagtgctccactggct
gaggaagaagttcagcagaagctggctcctggtgaggcagggaagaaaaagaaaaagaag
aaagttcgcatgcctccgaatgatttgtggaaagcttctcaggatcttgcagctgagagc
tttatgatgccaatgggtccctctgcctttaatccatattggagtggcatgcagactgga
atggaaggatacatggctccttatccaggtccaatgccctttatgggttatggattaagc
cctttggatatgccatatgggggagttatgcctccagatccttttggtgcccagagttat
atgatgcctgctgttccacctcagagggatcttgctgaatttggaatgaacatgaatctc
agacctcctctaatgagcagggaggaatttgaggcccgcaaagctgatgtcaggaggcgt
cgtgaaaatgagaggcgagctgaaagggagttttccagagattgggatccgggtagggaa
gtgagcggcggcggcgatgtttcttcaatgaaatctaagtcaataccacaatccagtgcc
agcggcgatccccatcataatcgtcgaaggtctgagagattatcaccggaacgttcagcc
cgtgagattgacccattaccaccacgcccttctaaaagaaagtctgaccgccatgaacac
ggtgatagagatgctgatgattttgattaccatgagcgtgaccgtagtgaccgtgatcac
cgccaccaccaccgccaccgttcagaatcctcatccaaagctgtatctgagactaccact
aaacccccttctacaacagtaacagaccgaaagcaaaaagttagcgtgttctctcgcatt
agctttccagcagaaggagaacccaccagtaagaagcgcaaggtatcatcctctagtgaa
gcagcaccagcagctactggtggcggcggccctttatcttctacacatcacaagtcatcg
tcaccagttaataatggctattatgatgactacaagtcatcttctgtgaagaccagaaag
agcagtagcagtgttgctgccacggccgccatggactacgagtccagtgatgatgacagg
cacttcaagaggaaaccctctaggtatgagccatcacctcctcctccagcagagtgggag
gaggatgttaagcattcaagaagagataaggaccggaagcatagataa
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