Populus trichocarpa (black cottonwood): 7471947
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Entry
7471947 CDS
T01077
Name
(RefSeq) tubby-like F-box protein 5
KO
K19600
tubby and related proteins
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7471947
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
7471947
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
7471947
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
Tubby family proteins
7471947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
7471947
NCBI-ProteinID:
XP_002300764
UniProt:
B9GRM5
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Position
2:2295215..2297548
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AA seq
416 aa
AA seq
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MSFKGKLKEIRDDISTTFSMGKLQRNRTNRRGRAYIAPELGGGSELFRELIEEQSPWANL
PPELLHDVIQRVEGSETSWPGRRDVVACASVCKSWREITKTVVKTPEQCGCITFPISLKQ
PGPRDAPIQCFIKRERATSTYLLYLGLSPALSGDMNKVLLAAKKIRKATSTDFRISFAGS
DFCQTSNTYVGKLRSNFLGTKFTIYDGQTPCPAMRSNCKPQRKVRSIQVSPGVAARNYNV
ATVSYELNVLRTRGPRRMHCTIHSIPISAIQEGGIAPTPSEFNNPSNEQSSPLSASKLKQ
PPIDFSSNSLAESSDSLCSKNDPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVA
AVEPCQNVPVEEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaagggaaagttaaaggagattagagatgacatttctaccacattttcgatg
ggaaagttacagaggaacagaacaaatcgaagagggagagcttatattgcgcctgaatta
ggaggtgggtctgagttgtttagggagttgattgaagaacagagtccgtgggctaatttg
ccgcctgaattgctacatgatgtgattcagagagttgaaggcagtgaaacttcatggcct
ggaagaagagatgttgttgcttgtgcttctgtttgtaagtcttggagagaaatcactaaa
actgttgttaagaccccagaacagtgtggttgcattacttttcctatctcactaaagcag
ccggggccgagagatgctccaattcaatgctttattaagagggaaagggccacttctact
tatcttttgtatctgggtctcagtcctgctttgtctggtgatatgaataaagtgttatta
gcagcaaagaagattaggaaggctacaagcacagattttcggatatcatttgctggaagt
gatttctgtcaaaccagcaatacctatgttggaaaactgaggtctaatttcctgggaacc
aaattcaccatttacgacggtcagactccatgtcctgcaatgagatccaattgtaagccg
cagcgtaaagttcgttccatccaagtgtcgccaggggttgctgctagaaattataatgtg
gccaccgtttcttatgagcttaatgtccttcgtaccagaggtccaaggagaatgcattgc
accattcactcgatccctatttctgctattcaagaagggggaatagctcctactccatcg
gaattcaataatcctagcaatgagcaatcttctccattgtctgcttcaaaactaaagcaa
ccacctattgatttcagctcgaatagccttgctgagtcatctgattcactttgcagcaaa
aatgatcccctgattttgaaaaataaagctcctagatggcatgagcagttgcagtgttgg
tgtctaaatttcaaagggcgtgttacagtggcctctgtgaagaatttccagctggtggca
gctgtggagccttgccaaaatgttccagtagaagagcaagaaaaagtcattctgcagttt
ggaaagattgggaaagatatcttcaccatggactatcgataccccctctctgccttccaa
gcttttgcaatctgcttgagtagctttgacactaaaccagcttgtgaatga
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