Populus trichocarpa (black cottonwood): 7471956
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Entry
7471956 CDS
T01077
Name
(RefSeq) protein SCARECROW
KO
K27742
protein SCARECROW
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7471956
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7471956
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
7471956
NCBI-ProteinID:
XP_002302035
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Position
2:complement(2381028..2382854)
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AA seq
512 aa
AA seq
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MKGAYEMAHGALDLIQPHEPWDHCASVAFPAPISNPFPKPVIENRCVNLERNELSEWVEH
VTKQLIDDVPDTETHDSLQTDTRMVYGDNNIVPSLLGDHFRQKKSMRRSYFDGNGEELQW
SHELGEHQASISEKDGSARSSMSRIDENGLNLITLLLECAVAISVDNLGEAHRMLLELTQ
MASPYGPSSAERVVAYFSKAMGSRVINSWLGICSPLINHKSVHSAFQVFNNVSPFIKFAH
FTSNQAILEAFQRRDSVHIIDLDIMQGLQWPALFHILATRIEGPPQVRMTGMGSSMEVLV
ETGKQLTNFARRLGLPFEFHPIAKKFGEIDMSMMPLRRGETLAVHWLQHSLYDATGPDWK
TLRLLEALAPRVITLVEQDISHGGSFLDRFVGSLHYYSTLFDSLGAYLHCDDPGRHRIEH
CLLYREINNILAIGGPARSGEDKFRHWRSELAKNSFMQVAMSGNSMAQAQLILNMFPPAH
GYNLVQGDGTLRLGWKDTSLFTASAWTSRASR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcatatgaaatggctcatggggctcttgatttgatacagccccatgagcca
tgggatcactgtgcctctgtagcatttccagctccaatttctaaccccttcccaaagcca
gtgattgaaaatcgctgcgtgaacttggagaggaatgagctctctgagtgggtagaacat
gtaacaaagcagctcattgatgacgtgccggatacggaaactcatgacagcttgcaaaca
gacacaagaatggtctatggggacaacaatattgtcccgtcactcttgggtgatcacttt
aggcagaagaaatctatgaggagaagctattttgatggcaatggggaagagctccagtgg
agccatgagcttggagaacaccaagcaagcatttctgaaaaagatgggagtgctagatca
agcatgagtaggatagatgaaaacggtttgaacttaataaccctactgttggagtgtgct
gttgctatatcagttgataatcttggtgaagctcatagaatgttgcttgagctgactcag
atggcttctccttacggcccttctagtgctgaaagggttgtggcttatttttctaaggcc
atgggtagtagggttataaactcgtggttaggtatttgttctccattaatcaaccataag
agcgttcatagcgccttccaagtctttaacaatgtctctccttttatcaaatttgctcac
ttcacctccaaccaagcaatccttgaagcttttcaacgccgcgatagcgttcacataatc
gacctcgatatcatgcaaggcttgcaatggccggccttatttcacatcctggccaccaga
attgagggtccgccccaagttcgaatgaccggcatgggctcatcaatggaagtcttggtg
gagacagggaaacaacttaccaatttcgctaggcgacttggactgccatttgagttccac
ccaattgcaaagaaatttggagaaattgacatgtcaatgatgccactcaggaggggtgaa
acactagccgtgcattggctacagcattccctctatgatgccacaggacctgattggaag
acattgagacttcttgaagcattggccccaagagtgatcacattagttgagcaagacatc
tctcatggtggatctttcttggaccgtttcgtaggctctctgcattactactcaacactg
tttgattcccttggtgcatatttgcattgcgatgatccaggcaggcaccggatagagcat
tgccttctctacagagaaatcaacaatatattggcaataggagggcctgcacgaagcggt
gaggacaagttcaggcattggagaagtgagctagctaagaactcttttatgcaggtggca
atgagtggaaactcgatggctcaagcacaacttatattgaacatgttccctcctgctcat
ggctataaccttgtgcaaggagatggaactttgaggctgggttggaaggatactagcttg
ttcactgcatctgcttggacttcacgtgcttctagatag
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