Populus trichocarpa (black cottonwood): 7471982
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Entry
7471982 CDS
T01077
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7471982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7471982
03036 Chromosome and associated proteins [BR:
pop03036
]
7471982
03400 DNA repair and recombination proteins [BR:
pop03400
]
7471982
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
7471982
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
7471982
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
7471982
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
7471982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
PTCB-BRCT
BRCT_3
Motif
Other DBs
NCBI-GeneID:
7471982
NCBI-ProteinID:
XP_002302058
LinkDB
All DBs
Position
2:complement(2695962..2704698)
Genome browser
AA seq
996 aa
AA seq
DB search
MANPQKAWKAEYAKSARSSCKTCKSIIDKEILRLGKMVHAKQFDGFMPMWNHASCILKKA
NQIKFIDDVEGIESLRWEDQQRIRKYVEEGGGGGDDGASGSGPPSAKAAKAMEYGIELSQ
TSRATCKSCSEKIMKGEVRISSKPDGQGPRGLAWHHANCFMDLYPSVQVDKLSGWESLAA
PDQAVVHSLVKKVPSTAKTGIKNEGKEDEELQQSSSKAGAKRRKDISGDQKSKVAKSEDV
STSRAASAKNDSELDSKLESQSKELWALKDDLKKHVTTVELRALLEANSQISNGSELDLR
DRCADGMVFGALGGCPMCSGSLHYSGGMYRCGGYLSEWSKCSHSTREPARLKGKWKIPDE
TDNQYLIKWFKSQKRNKPVRILPPPSSNNLSGSQATSSQSQSSKSENLGDLKVAVSGLPK
ESLKEWKGKIEAAGGQLHAKIKKDTNCFVVSGVMSSEDADMRKARRMKLPIVREDYLVDC
FKRQKKLPFDSYKVEASGGVSSMVTVKVKGRSAVHEASAMQDTGHILEDGKSIYNTTLNM
SDLSTGVNSFYILQIIQDDKGLECYVFRKWGRVGNEKIGGNKLEEMSKSDAIHEFKRLFL
EKTGNPWEAWEQKKDFQKKPGRFFPLDIDYGVNRQVTKKTRSDADSKLAPPLVELMKMLF
DVETYRAAMVEFEINMSEMPLGKLSKNNIQKGFEALTEIQNLLSSNAHDPSIKESLIIDA
SNRFFTVIPSIHPHAIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDDKYKKLH
CDICPLPHDSEDYQLIEKYLLTTHAPTHTDWSLELEEVFLLERRGEFDRFARYRETLKNR
MLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADLVSKSAQYCFTDKKNPVG
LMLLSEVALGEVYELKKATYMEKPPEGKHSTKGLGKKVPEESGYVKWRNDVIVPCGKPVS
SKVKASELMYNEYIVYNTAQVKMQFLLKVRFHHKRR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctcagaaggcatggaaggcggagtacgccaagtcggctcgttcttcctgc
aagacctgcaaaagtatcatcgacaaagagattctcaggctcggcaaaatggtccacgcc
aaacaattcgacggtttcatgcctatgtggaaccatgccagttgcatattgaagaaggca
aatcagataaaattcattgatgatgttgaaggtatagaatcacttcgatgggaagatcag
cagaggattagaaaatatgttgaggaaggaggtggtggtggtgatgacggtgctagtggt
agtggtcctccaagtgcaaaggctgcaaaggctatggaatatggtattgaactttcacaa
acttcacgtgcaacttgcaagagttgcagcgaaaagatcatgaaaggagaggttcgtatt
tcctccaagcctgatggacaaggacctagaggattggcatggcatcatgccaattgtttc
atggatttgtacccatctgtccaagtggataagttgtcaggatgggaaagccttgcagct
ccagatcaggcggtggttcattctctggttaagaaggttccttctactgctaagactggc
attaaaaatgagggaaaagaggatgaagaacttcaacaatcatcttccaaagctggagca
aaacgtagaaaagatataagtggtgatcagaagtcaaaagttgccaaatctgaagatgta
tcaactagcagggctgcatctgcaaagaatgatagtgaattggatagcaaactcgagtcc
caatccaaggaattgtgggccctaaaggatgaccttaaaaagcatgtgacaacagtagag
ttgcgtgcactgctggaagcgaatagccaaatttctaatggatcagaacttgatttgcga
gaccgttgtgctgatgggatggtttttggagcacttggcggctgcccgatgtgttctggc
tctcttcattattctggaggtatgtataggtgtggtgggtacctgtcagaatggagcaaa
tgttcacattcaactcgtgaaccagcacgtcttaaaggaaagtggaaaattcctgacgaa
actgataatcaataccttatcaagtggtttaaatcacaaaagcgtaacaaaccagttagg
atacttcctccaccatcatctaacaacctttctggaagtcaagctaccagcagccagtct
cagtcttcaaagagtgaaaatctgggagatttaaaagttgctgtttctgggttacccaag
gaatccctgaaagaatggaagggaaaaatcgaggcagcaggtgggcagcttcatgccaag
atcaagaaagatacaaactgctttgttgtgagtggtgtaatgtcttctgaagatgctgat
atgaggaaagcaaggaggatgaaattgccaatcgtcagggaggattacctggttgactgt
tttaaaagacagaagaagcttccatttgattcttataaagttgaagcctcgggtggggtt
tctagtatggtcactgtcaaagtgaaagggcgtagtgctgtgcatgaagcttctgctatg
caagacactggacacatccttgaggatgggaaaagcatctataacacaactttgaacatg
tctgacttatcaaccggtgttaacagcttctacatccttcagataatacaagatgacaaa
gggttagagtgttatgtgttccgtaaatggggccgagttggaaatgagaaaattggagga
aataaacttgaagagatgtcaaaatcagatgccatccatgaatttaagcgtttattcctt
gagaagactggtaatccatgggaagcatgggaacagaaaaaggattttcagaagaaacct
ggcagattcttcccattggatattgattatggagtaaacagacaggtgacaaagaaaact
aggagtgatgcagacagcaaattagctcctcctctggtggaattgatgaagatgctcttt
gatgttgaaacatacagagctgctatggtggagttcgagattaacatgtcagaaatgcct
cttggaaaactgagcaaaaataatatccaaaagggttttgaggctttgacagagatccag
aatttattaagtagcaatgcacatgatccttctatcaaagaaagcttgataatcgatgct
agcaatagatttttcactgtgatcccttctatccatcctcatgctatcagagatgaagat
gattttaaatcaaaggtgaaaatgttagaagctcttcaggatattgagatagcttcaaga
ttagttggctttgatgtggatagcgatgattcccttgatgataagtataagaagctccat
tgtgatatatgtccacttcctcatgacagtgaggactatcagttgattgagaagtatctc
cttacaactcatgcaccaactcatacggattggagtcttgaactggaagaagtatttttg
ctggagagaagaggagaatttgatagatttgcccgttatagagaaacgcttaagaacaga
atgctgctatggcatggttctcggttgacgaactttgtgggaatacttagccaaggactt
agaatagctcctcctgaagcaccaacaactggctatatgtttggtaaaggggtttacttt
gctgacctggtcagtaagagtgctcagtattgctttactgataagaaaaatccagtggga
ctaatgcttctcagtgaagttgccctaggggaggtctatgagctgaagaaggcaacgtat
atggaaaaaccaccggagggaaagcactctacaaaagggcttggcaagaaggtacctgag
gagtcgggatatgtgaagtggaggaatgatgtcattgtaccttgtggcaaaccagtgtct
tcgaaagtcaaggcctctgagctgatgtacaacgagtacattgtttataatacagctcaa
gttaaaatgcagttcttgttgaaggtgaggtttcatcacaagagaagatga
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integrated database retrieval system
