Populus trichocarpa (black cottonwood): 7471987
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Entry
7471987 CDS
T01077
Name
(RefSeq) myosin-9 isoform X1
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7471987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7471987
04131 Membrane trafficking [BR:
pop04131
]
7471987
03029 Mitochondrial biogenesis [BR:
pop03029
]
7471987
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7471987
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7471987
mRNA cycle factors
P-body specific factors
7471987
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7471987
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7471987
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7471987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_16
Zeta_toxin
nSTAND3
AAA_22
CbiA
PRP1_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
7471987
NCBI-ProteinID:
XP_024451728
LinkDB
All DBs
Position
2:complement(2733459..2746463)
Genome browser
AA seq
1171 aa
AA seq
DB search
MGMPANVEIGSHVWVEDPEVAWIDGIVINIEQDEVEVQTSDGKTVAVSSSRIYPNDVEAL
SGGVDDMTRLQYLHEPAVLHNLATRYEINEIYTYSGNILIAVNPFQPLSHLYDVYVMERY
KGAPIEGLSPHVFTIADVAYREMIKEGRSNSILVSGESGAGKTETTKMLMRYLAYLGGHS
GAEGRTVEQQVLESNPVLEAFGNAKTAKNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPHEEIEKYKLGNPKSFHYLNQSNCYELVGVSDAQEYI
ATRRAMDVVGINEKEQDAIFRVVAAILHLGNINFEKDEDIDSAVVKDEQSLFHLQMTADL
LMCDPLSLEDALCKRVMITPEEIIKRSLDPHAAAVSRDGLAKTIYSRLFEWLVDKINVSI
GQDPNSKCLIGILDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYAKEEIN
WNYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFIKPKL
TRSDFTIVHYAGEVQYQSGQFLDKNKYYVVAEHQDLLSASKCSFIAGLFPPLSEESAKPS
KFSSVCSRFKIQLQQLMDILNSTEPHYIRCVKPNNLLKPATFDKINVIQQLRSGGVLEVI
RIKCAGYPAHRTFSEFLIRFGILAPEIFKGNYEEKVACKWILEKMELKGYLMGKTKLFLR
AEQMAELDAKKARLLRNSATVIQRHFRTYTTRKDYIVLRKSSIHIQSHWRGRLARELYKY
KRKEVAAVKIQKNLRRQLARRAYTDIRISALVVQTGFRAMAARKDFRFREQTKAATIIQT
CWRCHRAVSYYKKLKKASVISQSRWRGRTVKNLEAATIIQAYWRRYRAVSYYKKLKTASA
ISQCTWRRTAGKEHSNVKMAIRETGSDEEENYKLEKQVEELRCCFPSEKHPKMDLEETKT
QEIDESWFSLQTSQNKVDETNALPPEEHYAVLRTIAVHPAVIETSTPISDSKKVENLNAE
VKKLKALLLSEKQRADNFERTYAEVCKLSEKRRKKLEETERRVYRLQASLNKMLYSMSDQ
FAELKMILYASSNSNSTSLPVKIDVQADVAPNNSDASSSDSDFTFPVPALASVDFSSPDP
NAFQLIVQDLSTTEISGSDNGDKEGAFDDFF
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgccggcgaatgtggaaattggttctcatgtttgggttgaagatcctgaagta
gcttggatagatggaattgtaattaatattgaacaagatgaagttgaggttcaaactagt
gatggaaagacagttgctgtaagttcatcgaggatttatccgaacgatgtggaggctctt
tccggtggagttgatgacatgactaggctgcagtatttacatgagcctgcagtccttcac
aatttggcaactagatatgaaatcaatgaaatttatacttatagtggaaacattcttatt
gctgtcaatccgtttcaaccactctcacatttatacgatgtttacgtgatggagcgatat
aaaggagccccaattgaaggactaagccctcatgtttttacaattgctgatgttgcatac
agggaaatgatcaaagagggtagaagcaactcaattctggtcagcggtgaaagtggggct
ggtaagaccgaaacaactaaaatgctcatgcgctaccttgcatatttgggtggccattct
ggtgctgaaggacggactgttgaacagcaagttctagaatcaaatccagttcttgaagca
tttggcaacgcaaagactgctaaaaataacaattctagccgttttggaaaatttgttgag
atccagtttgataagaagggaagaatatctggagcagctatcagaacttatcttctcgag
aggtctcgtgtttgccaaatttctgacccagagcgcaactatcactgtttttacctttta
tgtgctgcaccacatgaggagattgagaaatataagctgggaaatcccaagtcttttcac
taccttaatcaatccaattgctatgagctggttggtgttagtgatgcccaagagtatatc
gccactaggagagccatggatgttgtcgggataaatgagaaagagcaggatgctattttc
agagttgtggctgcgattcttcatcttggtaatatcaattttgaaaaggatgaagacatt
gattcagctgtagtaaaagatgagcaatccctatttcatcttcaaatgacagcagacctt
ctcatgtgcgatcctctttcattggaagatgcactgtgtaagcgtgtaatgataacccca
gaagaaatcatcaagagaagtcttgatcctcatgctgcagcagtgagcagggatggtttg
gccaagacaatatattctcgcttgtttgagtggttggtggataaaattaatgtctccatt
gggcaagatcctaactcaaaatgcctgattgggatccttgacatttatggtttcgaaagc
tttaaggctaacagtttcgaacagttttgcattaattttacaaatgaaaagctgcaacaa
cacttcaaccagcatgtattcaagatggagcaagaggagtatgcaaaagaggaaatcaat
tggaactatgtggaatttgttgataatcaagatgttctggatcttattgagaagaaaccg
ggtgggataattgctctgcttgacgaagcatgcatgtttcctaaatcaactcacgagaca
tttgcacaaaagctctaccaaacattcaaagatcataagcggttcatcaagccaaaactg
actcgctcggattttaccattgttcattatgctggagaggttcaatatcagtctggtcaa
tttttagacaaaaacaaatactacgtggttgctgaacatcaagatttgttgagtgcttca
aaatgctcttttatagcaggtctctttcctccactttcagaggagtcagccaaaccatcc
aagttctcatctgtttgttcccgttttaagatccaactacagcaattaatggatatactg
aattccacagagccccactacattcgatgtgtgaaaccaaataatttattaaaacctgcc
acatttgacaaaatcaatgtcattcaacagttacgttctggtggagttctagaggtaatc
agaatcaaatgtgctggttaccctgctcataggaccttctctgaattcctaattcgattt
ggtattcttgcaccagagatttttaaagggaattatgaagaaaaggtggcatgcaaatgg
attctggaaaagatggagctcaaaggatatctgatggggaaaacaaagttgtttctaaga
gctgaacagatggctgagctagatgcaaaaaaagcaagattacttcgcaactcagctaca
gttatccaaaggcactttagaacttacaccactcgtaaagattacattgtattgcggaag
tcctctattcatatacaatctcattggagaggaagacttgctcgtgaattatataagtac
aagcgaaaggaggtggcagcagtcaaaattcaaaagaatttgcgtagacaattggccaga
agggcatataccgatattagaatatctgcacttgtggtgcaaacaggttttcgggcaatg
gctgcacggaaggatttcagatttagagagcaaaccaaggcagcaactattattcagact
tgttggcgttgtcatagagctgtgtcatactataagaagctgaagaaagcatcagttatt
tcacaaagcagatggaggggaagaacagtcaagaatttagaggccgcaactatcatccag
gcttactggcgtcgctatagagctgtgtcttactataagaaactaaaaacagcatcagct
atctctcagtgcacatggagaagaactgctgggaaggagcattcaaatgtaaagatggca
ataagagaaacaggttcagatgaagaagaaaattataaacttgaaaaacaagtggaggaa
ctcagatgctgttttccgtcagaaaaacatccaaagatggacttggaagaaacaaaaaca
caagaaatagatgagtcgtggttttctctacaaacttcccaaaacaaagttgacgaaaca
aatgcattgcctccggaggaacattatgctgtgctgagaacaattgcagttcatcctgct
gtaatagaaacctcaactccaatctcagattctaagaaggttgagaacctcaatgctgaa
gtgaaaaaattgaaggccttgttgttgtcagaaaaacaaagagctgataattttgaaagg
acatatgcagaagtctgcaaattaagtgaaaaaagacgcaaaaaactagaagaaactgaa
cgaagagtctatcgacttcaggcctcactgaacaagatgttatattccatgtccgatcaa
tttgcagagctgaaaatgatcttatatgcttcatcgaactcaaattcaacttccctaccc
gtcaaaattgatgttcaggctgatgttgctcccaataactctgatgcctcatccagtgac
tctgatttcacttttccagttcctgcccttgcctcagttgacttctcttcccctgatcct
aatgctttccagctgatagttcaggatctttcaacaacagaaatttcaggttctgataac
ggtgataaagagggtgcatttgatgacttcttctga
DBGET
integrated database retrieval system
