Populus trichocarpa (black cottonwood): 7472117
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Entry
7472117 CDS
T01077
Name
(RefSeq) rac-like GTP-binding protein 5
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04148
Efferocytosis
pop04517
IgSF CAM signaling
pop04518
Integrin signaling
pop04620
Toll-like receptor signaling pathway
pop05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
7472117
04518 Integrin signaling
7472117
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7472117
04148 Efferocytosis
7472117
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
7472117
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
7472117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7472117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7472117
04031 GTP-binding proteins [BR:
pop04031
]
7472117
Membrane trafficking [BR:
pop04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
7472117
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
7472117
Macropinocytosis
Ras GTPases
7472117
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
7472117
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7472117
Exosomal proteins of other body fluids (saliva and urine)
7472117
Exosomal proteins of colorectal cancer cells
7472117
Exosomal proteins of bladder cancer cells
7472117
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
7472117
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
7472117
NCBI-ProteinID:
XP_006379285
UniProt:
U5G6M2
LinkDB
All DBs
Position
9:10902808..10906912
Genome browser
AA seq
198 aa
AA seq
DB search
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL
DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKAVLQP
LKQKKKKKRQAQKACSIL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttcaagattcataaagtgtgtcactgttggtgatggtgctgttggcaagact
tgcatgcttatttcctacactagcaacactttccctacggattacgtgccaaccgtgttt
gacaatttcagtgcgaatgtggttgtcgatgggagcactgtcaatttagggttgtgggat
actgctggccaagaagattacaatagactgaggcctttgagctataggggggcagatgtt
ttcctgcttgccttctccctcattagcaaggccagctatgaaaatgttgcaaagaaatgg
attcctgaattgaggcattatgcacctggtgttccaattattcttgtcgggacaaagctc
gatctccgagatgataagcaattctttatagatcacccaggtgcggtgcccattaccaca
gctcagggagaggaactgagaaagctaataggggctcctgtatacattgagtgcagttca
aaaacacagcagaatgtcaaagcggtctttgatgcagccattaaggccgtcctccagcct
ctgaagcagaagaagaaaaagaagagacaggcacaaaaggcctgctccatattgtga
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