Populus trichocarpa (black cottonwood): 7472150
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Entry
7472150 CDS
T01077
Name
(RefSeq) protein XAP5 CIRCADIAN TIMEKEEPER
KO
K13119
protein FAM50
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7472150
Spliceosome [BR:
pop03041
]
Complex C
Other components
Complex C specific factors
7472150
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Gene cluster
GFIT
Motif
Pfam:
XAP5
Motif
Other DBs
NCBI-GeneID:
7472150
NCBI-ProteinID:
XP_052311534
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Position
9:10604873..10608464
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AA seq
336 aa
AA seq
DB search
MSGMGDGYVGTAQDGVRIRRLQKQREAERLKIQELKTKSASDNGQPGLLQFGSSTSEILE
TAFKKETVGLVTREQYVEKRVNIQTKFEEEEKEKLEKLRKEEEDLQLQKRKKRKIKGSSK
LSFADDFENGSDEEDVENKTSEPNNLVRGKFGKDPTVETSFLPDSEREAEEQAERERLRK
QWLREQEQIQNEPLEITYSYWDGAGHRRVIQVRKGDAIGEFLRGVQQQLAPEFREIRTTS
VENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGK
VVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatgggagacgggtacgtgggcacggcccaagacggcgtgaggatacggcgg
ttacagaagcagagagaagctgaacgccttaaaatccaagagctcaaaaccaagtctgcc
tccgataacggccagcctggtctcctccaattcgggtcaagtacctccgagattcttgag
actgcatttaagaaggaaactgtgggtttggttacaagagaacagtacgtggagaagagg
gttaatattcagaccaagtttgaagaagaagagaaggagaaactagaaaagctacggaaa
gaggaggaggatcttcagttgcagaagcgtaaaaagaggaagattaaggggagttctaag
ttgtcttttgcggatgattttgagaatggaagtgacgaagaggatgttgaaaacaaaacc
tcagagccaaataatttagtgcgggggaaatttggaaaagatcccactgtggaaacaagc
tttttgcctgacagtgagcgagaggcagaggagcaggctgagcgtgaaaggctgcggaaa
cagtggcttcgtgaacaggaacagattcaaaatgagccccttgaaatcacttacagctac
tgggatggagcaggccatagaagagtgatccaggttcgtaaaggtgatgccataggagag
tttcttcggggagttcagcaacaacttgcgccagagttcagagaaattaggactacttct
gtggagaatttgctttatgtgaaagaggatcttatcattcctcatcaacacagtttctat
gagttgatcgttaacaaagctaggggaaaaagtggaccgctcttccactttgacgtgcac
gaggatgtgcgaacaattgctgatgcaaccatagagaaggatgagtcccatgctggtaaa
gttgttgagaggcactggtatgaaaagaacaaacacatctttcctgcttcgagatgggag
atatatgatccgacaaagaagtgggagcgttacaccatccacggggattga
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