Populus trichocarpa (black cottonwood): 7472306
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Entry
7472306 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat MAX2 homolog A
KO
K27701
F-box protein MAX2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7472306
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7472306
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_5
LRR_RPS2
F-box-like
DUF7062
LRR_EndoS
LRR_4
Motif
Other DBs
NCBI-GeneID:
7472306
NCBI-ProteinID:
XP_024437394
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All DBs
Position
11:5823991..5827058
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AA seq
693 aa
AA seq
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MAKKFNTNVHFHDIPDAILSSIFSLITDTRSRNAMSLVCLKWHLIERSTRTCLSLRGNIR
DLFLLPTCFRAVSNLDLSLVSPWGRPILDSSPNTTLLAQVLHCTFPSVVTLTVYARNPSI
LHLLAPQWPNLRQIKLVRWHKRSPTTLGSDFLALFEHCHSLASLDLSHFYCWTEDLPPAL
EAYPSIAASLSHLNILNYTSSDQGFKSHEILAITSACPNLREFLAACIFDHRYIGFVGDE
TLLSLATNCPRLSLLHLVDSSSLSAARGDPDNDGYTTEDARIRQTMLIEMFSALPLLEEL
VLDVCHNVRDTWVALEMLNSKCPRLKSLKLGQFHGICKGIDARPDGIALCSRLESLSIKN
CADLTDSGLISISLGCPRLTKFEVQGCKKITKLGMTKLASILRKTLTEVKISCCKHLNTV
TSLQALEPIRDCLQRLHIDCVWEMVEQSGSEATSSAKYDGFKCSDKRRGIWEDANLKKKY
KKYNDNENGYASSNWAKLQCLSLWIPVGELLNPLVLAGLDNCPMLEEIQIKVEGDCRHQS
RLSPDGFGLSSLLCYPRLSKMHIDCQAAIGYALTAPSGHVDLSPWERFYLNGIGRLNLTE
LNYWPPQDIDYNKRSLSLPAAGLLAQCRTMRKLFVHGTANEHFMMFLLKVQTLRDVQLRE
DYYPAPENDNSTEMRIDSCSRFEDALNRRAIPD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaatttaacactaatgttcatttccatgacataccagatgcaatcctttcc
agtatattctccttgataacagatacacgtagccgcaacgccatgtcccttgtgtgcctt
aaatggcacttgatagagcgctctacacgcacttgtctctctcttagaggcaatatccgt
gacctctttcttctcccaacttgctttagagctgtctctaatcttgatctctcattggtt
tccccttgggggcgtccaattcttgattcctcaccaaacactacccttcttgctcaagtt
ctccattgtacctttccctctgttgtaactctcactgtttatgcaagaaatccttcaatt
cttcatcttcttgctcctcaatggcctaacttacgccagattaagcttgttcgctggcac
aagcgatctccaactactttgggctctgattttcttgcattgtttgagcattgccattca
cttgcctcacttgatctctcgcatttctattgctggacagaagatttacctccagccctt
gaagcatacccttccattgctgcttctttaagccatcttaatatccttaattacacttca
tctgatcagggattcaagtcccatgagattcttgccattacctctgcatgcccaaatctc
cgtgaatttttagcagcctgtatatttgaccatagatacattggttttgttggagatgaa
accttgctatctcttgccacaaattgtcctcgcctttctcttcttcaccttgtcgattct
agttccttgtctgctgccaggggtgatccagataatgatggatacacgaccgaggatgct
agaatcagacaaactatgctaattgaaatgttttctgcattgccattgcttgaagaattg
gttcttgatgtttgccacaatgttagggatacgtgggtagcactggaaatgcttaattcc
aagtgcccaaggctcaagtctttaaagttgggacagtttcacggaatctgtaagggaata
gatgcacggcccgatgggattgcactttgcagcagattggaatcattgtcaatcaagaac
tgtgctgacttgactgattctggtttgatttcaatctcccttggctgcccaagactcacc
aagtttgaggtccagggttgtaagaagatcacgaaattagggatgacaaaactagcttct
attctgaggaaaactttaactgaagtgaaaatctcttgttgcaagcatctcaataccgtg
acctcgttgcaggcattggaaccgatccgagattgtctacaacgattgcacatagattgc
gtgtgggaaatggttgaacaatcaggatcggaggctaccagttcagctaaatatgatgga
ttcaaatgttcagacaagagacgtggcatttgggaagacgcaaacttgaagaagaaatac
aagaagtataatgacaacgagaatggatacgcctctagtaattgggcaaaactgcagtgt
ctttcactttggattccagtcggcgagttgctgaatccattggttttggcaggattggat
aactgccctatgctggaggagatacaaataaaagttgaaggtgactgtaggcatcagtca
agactttccccagatggtttcggtctcagctcccttctatgctaccctcggctttcgaag
atgcacatagactgtcaagctgcaataggatatgctcttactgccccttctggacatgtg
gatttgagcccgtgggagaggttttatcttaatgggattggaagactgaacctgactgag
ctcaactattggcctccacaggacattgattataataaaaggagcctatctctcccagca
gcgggattgcttgcacagtgtaggactatgaggaagctatttgttcatggcacagctaat
gaacatttcatgatgtttcttttgaaagtacaaactctcagagatgtccagttgagggaa
gattattaccctgcaccggagaatgacaatagcacagagatgagaatagactcttgctct
agatttgaggatgctctcaacaggcgtgcgattcctgattga
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