Populus trichocarpa (black cottonwood): 7472334
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Entry
7472334 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7472334
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7472334
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
7472334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
7472334
NCBI-ProteinID:
XP_002316849
UniProt:
B9I1R4
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Position
11:13528993..13535126
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AA seq
520 aa
AA seq
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MEGHIQYPKIQLDDYQPQYLSHLISKEMEDHRCKSNIIPKNAVAQEDRTLLRKCESEASQ
PDTANNGVENVSKTCHSKQGKVFFYDTPHSEETGVWIPVSVPPMSESEHQEWSRGLPLNG
GCFPDEDLDWNQLLENNKELTMWDVVAEMLVAARGKVSAIASGDVHRCGISWISDHLLEQ
AWSEMAQTLTEANFGNSWEILEAKPPKWLADSSASACMLCNVRFHPIMCSRHHCRFCGGI
FCNDCSKGRSLLPKNFHTRNPQRVCDVCCVRLESVQSYLKDHESRAAQLPTQDLTDLSTL
RSWLNFPWGQSMEYEIYKATNTIQGYAKVGSLLPEKSIPDSILKQAKGLAILTIAKVGVM
VTYNIGTGLVVSRREDGSWSPPSAISSFGMGWGAQVGGEFTDFIIVLRTLGAVKTFSGNL
HFSVGAGLSAAVGIVGRAAEADLRGGDGGLATCYTYSCSKGAFVGCSLEGSILATRTQEN
ARFYGASMNASDILLGSLPGPPAASMLYHALSNLFGKLER
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagggacatatacaataccctaaaatccaattagatgattaccagcctcaatatctc
tctcacttgatttctaaagagatggaggaccatagatgtaaaagcaatataataccaaaa
aatgctgttgcacaagaagataggacactgctcagaaaatgtgaaagtgaagcgtctcaa
cctgacacggctaacaatggtgtggaaaatgtttcaaagacctgccattcaaagcagggt
aaagtttttttttatgatacaccacactctgaagaaactggagtttggatacctgtctct
gttccaccaatgtcagaaagtgaacatcaagaatggagtagaggtctccctcttaatggg
ggatgcttccctgatgaagatctagattggaatcagctccttgagaacaataaggagctg
accatgtgggatgtggttgctgagatgttggtagcagctcgaggaaaagtgagtgccatt
gcttctggagatgtccacagatgtggaatttcctggatatcagatcatcttcttgagcaa
gcttggagtgagatggcccaaactcttacagaggctaattttggcaacagctgggagatt
cttgaagccaagcctccaaagtggttggctgatagttctgcttctgcttgcatgttgtgt
aatgtaagattccatcctatcatgtgctccaggcatcactgccgtttttgtggtggaata
ttttgtaatgattgctcaaaggggagaagcttgttgcccaaaaatttccacaccagaaac
ccgcaacgtgtttgtgatgtgtgctgtgtgcggcttgagtcagtgcaatcatacttgaag
gaccatgaaagtcgcgctgctcagttgccaacacaagatctaactgacctcagtactttg
agatcatggctcaatttcccatggggccagtccatggagtatgagatttacaaggccaca
aacaccattcagggttatgctaaggttggttctctactgcctgagaagtccataccggat
tctattttgaaacaagcaaaaggccttgcaatccttacaattgcaaaggttggtgtaatg
gtgacctacaacattgggacgggactagttgtttctcgtagggaggatggatcctggtct
ccaccatcagccatttcttcctttggcatgggctggggagctcaggttggaggggaattt
actgatttcataattgtgctgagaactttgggtgctgttaaaacattcagtggaaatctg
cacttctcagttggagctggtttgagtgcagctgttggcattgttggacgggctgctgaa
gctgatttaaggggtggtgatggtggtttggctacctgttacacttatagctgcagtaaa
ggtgcatttgttggatgttcacttgaaggaagtatacttgcaactcgaacacaggaaaat
gcaagattttatggtgcatccatgaatgcatcagatattcttctggggtcactgcccggg
cctcctgctgcttccatgctttatcatgctctctcgaatctttttggtaagcttgagagg
tga
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