Populus trichocarpa (black cottonwood): 7472482
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Entry
7472482 CDS
T01077
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7472482
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
7472482
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
7472482
NCBI-ProteinID:
XP_024443807
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All DBs
Position
16:14164657..14168345
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AA seq
350 aa
AA seq
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MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKL
RPLAKHPKDKIRAVASDLLETWKKIVIDETMRKKNGSIDNNSSVTAEVSKSATVKVEKLQ
KTSMVKVSTSETVKVEKMDQDKTVKVAQTCKEEIQTSSVKKPSQAPTGPPKLKTLVKCND
ALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKY
RSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKALFDCERG
GKAEATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagttggtggagttatttgataaagcaaagaaagctgcagatgcttctctc
aatgacgacaagtcgtctagtggaccggaggtgtctcggtgtgttgattcgttgaaacag
ctcaggaagtttaaagttaccagtgaaattctggtttccacacaggttgggaaaaaactt
cgaccccttgcaaagcatcctaaggataaaatccgagctgtggcctctgacttgcttgag
acgtggaaaaagatagtcattgatgagactatgagaaagaaaaatggtagcattgacaat
aatagttcagtaacagctgaggtatcaaaatcagcgactgtcaaagttgagaagcttcaa
aagactagtatggtaaaggtttcaacctcagaaactgtcaaagttgagaagatggatcag
gataagactgtcaaggttgcgcagacatgcaaggaggaaatccagacttcaagtgtgaag
aaaccatcacaagcacctactggtccaccaaagctgaagacactggttaaatgcaatgat
gctttacgcgacaaaattcgtgaacttcttgcagaggctttgtccaaagttgccagtgaa
gctgatgaggacattagagatgaagtagaggcatgtgacccaatccgagttgctgtctca
gtagaatctgcgatgtttgaaaagctgggtcggtcaaatggagctcaaaaaatgaagtac
agatccataatgttcaacatcaaggaccaaaacaacccggatttgaggagaaaagttctt
cttggacaggttcaaccacagaggcttgttacaatgccccctgaagaaatggcaagtgaa
caacggaaacgtgagaataaccaaattaaagagaaagcattgtttgattgtgaacgtggt
ggtaaagcggaagccacaactgatcagtttaagtgtggtcgttgtggacagcgcaagtgc
acttactatcagatgcagaccaggagtgcggatgaacctatgacaacttatgtgacatgt
gtaaactgtaacaaccactggaagttctgctaa
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