Populus trichocarpa (black cottonwood): 7472490
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Entry
7472490 CDS
T01077
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7472490
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7472490
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7472490
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
7472490
Peptidases and inhibitors [BR:
pop01002
]
Threonine peptidases
Family T1: proteasome family
7472490
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
7472490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
7472490
NCBI-ProteinID:
XP_002323091
UniProt:
A9P9I1
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All DBs
Position
16:14283861..14287137
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AA seq
246 aa
AA seq
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MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAASTTSIGVRGSDSVCVVTQKKVPDKL
LDQTSVTHLFPITKFLGLLATGITADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD
KSQVYTQHAYMRPLGVVAMILGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE
KKMKNDPALSYEETVQTAISALQSVLQEDFKATEIEVGVVRTGDCVFRVLSTEEIDEHLT
AISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggaagcggagctggatatgatcggcatatcaccatattctcccctgaaggc
cgcctctttcaagtcgagtatgcgttcaaggcagtgaaggcagcttccaccacttccatt
ggagttcgtggcagcgattctgtatgtgttgttactcaaaagaaggttccggacaagctt
ttggatcagactagtgttactcaccttttccctattaccaagttccttggattactggcc
accggcattactgctgatgcaaggaatttagtgcaacaagcaaggaatgaagcggcggag
tttaggtttagatatgggtatgaaatgcctgtggatgcattagccagatggatagcagac
aaatcgcaagtttatacacagcatgcatatatgagacctcttggagtagttgctatgatt
ttgggtattgatgaagagaacgggcctcagctttacaagtgtgatccagctggccacttt
tatggtcacaaggctacaagtgctggattgaaagaacaagaggctatcaatttcctggaa
aagaaaatgaaaaatgaccctgctctctcctatgaggaaactgtgcagactgctatttct
gctctgcaatctgttctccaagaggatttcaaggctactgagatagaggtgggagttgtg
agaacaggtgactgtgtttttagagtgctgtccactgaggaaattgatgaacatttaact
gctatcagtgaacgtgattga
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