Populus trichocarpa (black cottonwood): 7472567
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Entry
7472567 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein AGL61
KO
K12412
pheromone receptor transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7472567
03021 Transcription machinery [BR:
pop03021
]
7472567
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Yeast regulators
7472567
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
7472567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
DUF3871
Motif
Other DBs
NCBI-GeneID:
7472567
NCBI-ProteinID:
XP_002305331
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All DBs
Position
4:14809049..14809794
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AA seq
194 aa
AA seq
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MEGKQTRGRQKIAIKRIENEDDRLITFSKRRSGIYKKASELVTLCGAEVAVLVFSPAGKA
FSFGHPSIESVANRFLGQNIAPNDNTHPLVEAHRKVRINELNQQHNELLSEMEAERDRGK
VLKEGTSEKSSQGWWEAPIDELSLQELKQMNVMLEEFHKNLHKTINELRRNGGASSSSFQ
VHTGHATNIPFCQL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaagcaaaccagaggcaggcaaaagatcgcaataaaaaggatagaaaacgaa
gatgacaggctcatcacattctcgaaacgtcgatctgggatctacaaaaaggcaagcgag
ttggtgactctatgcggtgctgaggttgcggtgctagtgttctcaccagccggcaaggct
ttctcctttggccatccatctatagaatctgttgcaaatcgctttcttggacagaacata
gcaccaaatgataacacccaccctcttgtcgaggctcacagaaaggtgagaattaacgag
ctaaaccagcaacacaatgaactacttagtgagatggaagctgagagagaccgaggaaag
gtgctaaaggaagggacaagtgagaaatcaagccaaggttggtgggaagctcccattgat
gagcttagcctgcaagagcttaagcaaatgaatgtgatgctagaagagtttcataagaat
ttgcacaaaacaattaatgagctcagaagaaatggaggtgcatcttcatcatctttccaa
gttcatactggccatgcaactaatattccattttgccagctctaa
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