Populus trichocarpa (black cottonwood): 7472610 Help Entry 7472610           CDS       T01077                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop00040   Pentose and glucuronate interconversions pop01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:pop00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     7472610 Enzymes [BR:pop01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      7472610 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pec_lyase_N Pectate_lyase_4 Beta_helix Motif Other DBs NCBI-GeneID:  7472610 NCBI-ProteinID:  XP_024455152 LinkDB All DBs Position 4:complement(12003816..12006136) Genome browser AA seq 475 aa AA seqDB search MAVGKAMLIFVFTLATLIPSLLADIGIFDDVWQKRAQDAKKMTLEAYVPDPEEATDAFNV EVNKYSLAKNSSSLYGAFGSTNITNLDLDDDDNDNDNDADFEQFANSTRRNLRQGRKKYA GPCQVTNPIDRCWRCQRNWAKNRKQLAKCALGFGRRTTGGMAGRIYVVTDSSDNNVMKPK PGTLRHAVIQKEPLWIIFSKNMNIKLSKELIMSSHKTIDGRGHHVHISYGGGITIQFIHN VIIHGIRIHHIIATSGGNIRDSVDHYGIRTNSDGDGISIFGSTDVWIDHVSMSRCTDGLI DAIMGSTAITISNCHFTHHNDAILLGASDSYSGDHLMQVTVAFNHFGQGLVQRMPRCRWG FFHVVNNDYTHWRLYAIGGSKHPTIISQGNRFIAPPESHLKQVTKRDYATKGEWSKWTWR SENDLMMNGAFFVQSGQPRTKKPNRKFMIKAKPGAVATRMTRFAGALDCKPGRKC NT seq 1428 nt NT seq  +upstreamnt  +downstreamnt atggcagtgggtaaggccatgctgatctttgtttttactcttgcaacattgattccaagc ctgctggcagacattggcattttcgacgatgtgtggcaaaaacgagcgcaggatgctaag aagatgacattggaagcctacgtacccgacccggaagaggcaaccgatgctttcaacgtt gaagttaacaaatactctcttgcaaagaatagcagcagcctttatggtgcttttgggagc acaaacatcactaatttggaccttgatgatgatgataacgataacgataacgatgccgat tttgaacagttcgctaacagcactagaaggaacctgaggcaagggaggaaaaaatacgca ggtccatgccaggtgaccaacccaattgacaggtgctggaggtgccaaaggaactgggca aaaaaccgcaagcagttagcaaaatgtgcgcttggttttgggcgtaggactactggagga atggccggaaggatatatgttgtgacagatagctcggacaacaatgttatgaagccaaaa cctgggactttgcgtcatgctgtgatccaaaaggagccattgtggatcatattttcaaag aacatgaacattaagttgtcgaaagagttgataatgtctagccataagacgattgatggg cgtgggcaccatgtacacatctcttatggaggtggcattacaatacaattcatccataac gtaatcattcatggaattcgcattcatcacattattgctactagcggtgggaatattagg gactccgtggaccattatggaatcaggaccaacagtgatggagatggaatttccatcttc ggctccaccgatgtctggatcgatcacgtttccatgtctcgctgcaccgatggactcata gatgcaattatgggatccactgcaattaccatttccaattgccatttcacccaccacaat gatgccatcttgctgggagcaagtgatagctactcaggcgatcatcttatgcaagtcaca gttgcattcaatcattttggccaggggcttgtacagagaatgccaagatgcagatggggt ttcttccatgttgttaataatgactacactcattggcgcctgtatgctattggtggcagc aaacatcctaccattatcagccagggtaaccgcttcatcgcaccacctgagagtcatcta aaacaggtgaccaagagggactatgcaacgaagggagaatggagtaaatggacatggaga tcagagaacgatctaatgatgaatggagccttctttgttcaatctggccagccgagaacc aagaaaccgaacaggaagttcatgatcaaagccaaacccggtgcagttgctacaaggatg actcgctttgctggggcacttgattgcaaaccaggtagaaaatgctag

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