KEGG   Populus trichocarpa (black cottonwood): 7472638
Entry
7472638           CDS       T01077                                 
Name
(RefSeq) RNA-binding protein 1
  KO
K14411  RNA-binding protein Musashi
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    7472638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7472638
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     7472638
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 PHM7_cyt SET1_RBD RRM_Nup35 Pro_isomerase HSP90
Other DBs
NCBI-GeneID: 7472638
NCBI-ProteinID: XP_024450285
LinkDB
Position
2:complement(8777304..8779128)
AA seq 331 aa
MNIDEAKLFVGGISRETSEETLRNYFSKYGVVSHSLTAKDKITKFPRGFGFVVFSDPSSA
ARALQDNHVILGRTVEVKKALPKIEKHQQQRQHHPHGNQEASNGLGMNSDNSTSAKNNRT
KKIFVGGLASSLTEEQFKNYFEQFGRTVDVVVMQDSLTNRPRGFGFVTFDSEESVDKVLL
IGSHELNGKRVEVKKAVPKDRINGHIVRSGSNGFIGNGPQLANHPFYGQGYDPCYTSFPV
YNDVHGHFYGMSFYGSVYPMVGYGRPGLEVAPMAPMLGAGLFPYSNACLYPAYTHNMSSI
RGMEIGGHNRIVEAGVNGEESGSWQQWTRSI
NT seq 996 nt   +upstreamnt  +downstreamnt
atgaatattgacgaggcgaagctttttgtgggaggtatatctcgtgagacaagcgaagaa
actctaagaaattacttcagcaagtacggtgtcgtttcgcattctcttactgccaaggac
aaaatcactaaatttccaagaggatttggttttgttgttttctctgatccttcttctgct
gctagggctcttcaagataatcatgttattcttgggagaacggtagaagtgaagaaagca
ctacctaaaattgaaaaacaccagcagcaacggcaacaccacccccacggtaatcaggaa
gctagcaacggattgggtatgaatagtgataatagtaccagcgctaaaaacaataggacc
aagaagatctttgtgggaggtttagcatctagtctaactgaagaacagttcaaaaattac
tttgaacagtttgggaggacagtagatgtagttgtgatgcaagatagtttaaccaacagg
ccaaggggcttcggatttgtcacctttgattctgaggaatccgttgacaaggttttgctg
atcggttctcatgagttgaatggtaagagagtggaggttaagaaggctgtgccgaaagat
agaattaatggtcatattgttaggagtggttcaaatgggttcattggtaatggtcctcaa
cttgcaaatcaccctttctatggtcagggatatgacccatgctacacttctttcccggtg
tataatgatgttcatggtcatttttatggaatgagtttttatgggagtgtataccctatg
gtaggatatggaagacctggtttggaggttgcaccaatggctcctatgcttggagctgga
ctgtttccttacagcaatgcctgtctttatcctgcttatacgcataacatgagtagcatc
aggggtatggaaattggtgggcataatcggattgttgaggctggtgtgaatggtgaagaa
tctggttcgtggcagcaatggacacgttccatctga

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