Populus trichocarpa (black cottonwood): 7472992
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Entry
7472992 CDS
T01077
Name
(RefSeq) axial regulator YABBY 5 isoform X2
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7472992
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
7472992
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Ortholog
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_5
Zn_ribbon_Elf1
zf-LSD1
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-GeneID:
7472992
NCBI-ProteinID:
XP_002299655
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All DBs
Position
1:22126065..22132386
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AA seq
196 aa
AA seq
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MHHINERKPLRHPTYIPYHFSFLFCPTHFRVSVPSSSLFNIVTVRCGHCGNLLSVNMGAS
LQTLPLQDPQKLLLINSEDLNKNFGSSSKCNKVTASESTEHEPPRMPAIRPPEKRQRVPS
AYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDSNKHAKLDHQSFAG
EGTQKTSGLYEINGSL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacataaacgaaaggaaaccactaagacaccccacttacataccataccatttc
agttttctattttgcccgacacattttcgtgttagtgttccaagcagcagtttgttcaat
attgtgacagtaagatgcgggcattgtggcaatttgctgtctgtgaacatgggagcatcc
ttacaaacacttcctcttcaagatccccaaaaactgctccttattaactcagaagatttg
aacaagaactttggttcatcttccaaatgtaacaaggtcactgcttcagagtctactgag
catgaaccgcctaggatgcccgccatccgccccccagagaagaggcagcgtgttccttct
gcatataatcggttcatcaaggaggaaattcaaaggatcaaggctagcaatcctgacatt
agccacagggaagctttcagcacagcagccaaaaattgggcacattttcctcacattcac
tttggactgaagctggacagcaacaagcacgctaaattagaccaccagtcatttgcagga
gagggcacccaaaaaactagtggattgtacgagatcaatggctccctgtga
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