Populus trichocarpa (black cottonwood): 7473166
Help
Entry
7473166 CDS
T01077
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7473166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7473166
Spliceosome [BR:
pop03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
7473166
Complex B
7473166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
7473166
NCBI-ProteinID:
XP_002310221
UniProt:
B9HEV8
LinkDB
All DBs
Position
7:complement(2079227..2084151)
Genome browser
AA seq
497 aa
AA seq
DB search
MGDYNDAFMRNPNAAVRGSAKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
PPEKRKCPPYLGMAQFVSHFAEPGDPEYAPPIKEAETPAERKARIHAARLEKGAEKAAEE
LQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREFESYGPIKRVRMVADKVTNKPRG
YAFIEYMHTRDMKGAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
VNQKHSGREVQQSGGSSRSEEPRTREDRQTERDREVSRERGRDKERDREKSRERSHDKPR
DRDHREDRHHRDRERERDRDKERERGRDRDRDRTRDRGRDRGRDYERDRERDRGRDRDRT
RDRERDYEVSDPDRGRSHDRDESKHERDRLGERDYDHAEPEDDRGWYEQPEQGQRLPDAE
NDPRYDHYEHHRSRGPYDPMDVQGDQDRYDQYPDRDHDRYDQMEDDDYHYDRGTSESREK
EREYRRSERSVSRDYDN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggagattacaacgatgccttcatgcgcaacccgaacgccgccgttcgtggcagcgct
aaaggacagaaccgtgccaacgttctccagctcaaactgattgggcaaagtcacccgacg
ggtttaacagcaaatcttttgaagctctttgagcctcgacctcctctggaatttaaaccc
ccacctgagaagagaaaatgcccgccatatttaggtatggctcagtttgtgagtcacttt
gcggagcctggagatccggagtatgctcctcctatcaaggaagctgaaactcctgcagaa
agaaaggctaggattcatgcggcacgactagagaagggtgcagaaaaggctgccgaggag
ctccaaaaatatgatcctactaacgatccaaatgtgtcgggagatccatacaagacattg
ttcgttgctaggcttagttatgagactaccgagagtagaattaaaagggagtttgaatct
tatggaccaataaaacgggttcgcatggtagctgataaagtgacaaataaacctagagga
tatgctttcatcgaatacatgcatacacgagacatgaaaggtgcctataagcaagctgat
gggcggaagcttgatggaagaagggtactagtcgatgttgaacgaggtaggactgtccca
aattggcgacctcgcagacttggtggtggacttggaactaccagagttgggggtgaagaa
gttaatcagaagcattctgggagagaggttcagcaatcaggaggatcctctcggtctgag
gagccaaggacacgagaagatcggcaaactgaacgggacagggaagtgtctcgtgaaagg
ggaagggacaaggaaagagacagggagaagtcacgtgagcgctcccatgacaagccacgg
gatcgtgaccacagagaagataggcatcatagagatcgtgaaagagagagagaccgagac
aaggagagagaacgaggccgtgatcgtgaccgtgataggacacgtgatcgaggtcgggac
cgtggtcgggactatgagcgtgatcgagagagagaccgtggtcgggatcgtgatcgcact
cgggacagggagagggattatgaagtcagtgaccctgaccgtgggcgttcccatgatagg
gatgagtcaaaacatgagagggatcgactcggtgaaagggactatgatcatgctgagcca
gaggatgatcgtggctggtatgaacaacctgagcaggggcaaaggctgccagatgcagaa
aatgacccgcgttatgatcactatgagcatcatagaagcaggggaccatacgatcccatg
gatgttcaaggtgaccaggaccgctatgatcaatatccagaccgtgatcatgatcggtat
gatcaaatggaggatgatgattaccactatgatcgtggaacatccgagtcacgtgaaaag
gagcgtgaatatagaagatcagagaggtcagtttcccgggattatgacaactga
DBGET
integrated database retrieval system
