Populus trichocarpa (black cottonwood): 7473195
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Entry
7473195 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7473195
KO
K14856
protein SDA1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7473195
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7473195
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
Motif
Other DBs
NCBI-GeneID:
7473195
NCBI-ProteinID:
XP_002312655
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All DBs
Position
8:complement(12616113..12621099)
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AA seq
793 aa
AA seq
DB search
MADSLSASGRSSEKLSLQSLQSKMKIDPEGYETELGLVYNQFKSALDLFQQQAALSFASS
SGVCADPTIYKDLSDRATFLSHVTPFYPKQLAEFPAQLAEFLKSSARTLPSGLRCHVTQA
LILLINRDMVDISETLALFMELQTLGDRTLRNLAFTHVVHSIRRMNKKHKNEAKNRALQN
ILFSLLQQDDEARAKRALITLCELHRRKVWFDDRTANSICMACFHSSSRIMIAALSFLLD
YEKIEDNDNDDSDASSGEDDPNPRTAQVVISKESIYKAHNKGTVASKKKKKAKLQRAIRS
MKRQQRLSSENNNSNYYSPFNHLKDAQGFAERLFSRLQTCNERFEVKMMMLKVIARTVGL
HRLILLNFYPFLQKYVQPHQRDITNLLAAAVQACHDLVPPDAVEPLFKQIVNQFVHDHSR
PEAIAIGLNVIREICLRIPLLMNEDLLQDLVLYKKSHEKAVSIAARSLITLFREVCPSLL
IKKDRGRPIDPKARPKAYGEVNIVSSVPGVELLEELNDDDDDDEDKEDSDDVDDLASRGS
DDDSENEEMVSASDEGDQIYSDDAESEDGDVQDGSVDEDGDDAVDNDSGGGEGGDEDEDQ
EENDEDSYARAIINKVNKSTARKRKFSDFDGQLLAADTSLRALKKMTEEKLKKPPSDSTD
GILSNEDFQRIKELTAKKDARIALNRQGFKVPSSDDLSAKRVDPATLEVHVRARLNKEER
LALVRAGREDRESYKSRIAVKQKKTGGQSNRQKEHKKQMPLAAKRAKVARSRQEKKKKQS
LSGKQFRGKKAWK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccttgtcggcgtcggggcggagctcggagaagctgagccttcaatctctc
caatccaaaatgaaaattgacccagaaggttacgaaacggagctcggcttggtttacaac
caatttaagtccgctttggatctttttcaacagcaagcagctctcagtttcgcctcctcc
tccggtgtctgcgctgaccccactatttacaaggacctcagtgaccgcgccacttttttg
tctcatgttacacctttttacccgaagcagcttgctgagttcccagctcaactcgctgag
tttctcaaatcgtctgctcggactctgccttcgggacttcggtgtcatgttactcaagcg
cttattctactgattaatcgagatatggttgatattagtgaaactctagcattgttcatg
gagcttcaaacactgggagataggacattgaggaatttggcttttactcatgttgttcat
agcattaggaggatgaataagaagcataaaaatgaggctaagaatcgggcccttcaaaat
atcctcttttccttgctacagcaagatgatgaagcacgagcgaagagagcactcatcaca
ctatgtgagcttcatcgaaggaaggtgtggttcgatgatagaactgcaaattcaatttgt
atggcatgttttcattcatcatcaagaatcatgattgctgctctgtcttttctcctcgat
tatgagaagattgaagataatgacaatgatgatagcgatgcttcaagtggcgaagacgat
ccaaatcctcgaacagctcaagttgtcattagtaaagagtctatttataaggcacacaat
aaaggtactgtagctagcaagaagaaaaagaaagcaaaactgcagcgggccatacgtagc
atgaaaaggcagcaaagattgtcatcagaaaacaacaattcaaattattattcaccattc
aaccatcttaaagacgcacaggggtttgctgagaggctattttctcgccttcagacttgc
aatgaacgttttgaggtcaagatgatgatgttgaaagtaattgctcgaactgtggggctc
caccgcttgattttattaaacttttatccttttcttcagaaatatgttcagccacatcag
cgtgacatcacaaatttacttgcagcagctgtccaggcctgtcatgatctggtgcctcct
gatgcagttgagccattattcaaacaaatagtaaatcaatttgtacatgatcactcgcgt
cctgaggccattgctattggactgaatgtgatcagggaaatatgcttgcgaatacctttg
ttgatgaatgaagatttactgcaagaccttgtattatacaagaaatctcatgagaaggca
gtttcaatagctgctcgttcactcattactttattcagagaggtttgtccctctctgctg
attaagaaagatcgaggtcgtcccattgacccaaaagctaggccgaaggcctatggagaa
gtcaatattgtcagcagtgttcctggtgttgagttgttagaagaacttaatgatgatgat
gatgatgatgaagacaaggaggacagcgatgatgttgatgatttggcatcccgtggctct
gatgatgattctgaaaatgaggagatggtttctgccagtgatgaaggagatcagatttac
agtgatgacgctgaaagtgaggatggtgacgtgcaagatggctcagttgatgaagatggt
gatgatgctgtagacaatgacagtggtggtggtgaggggggggacgaggatgaggatcag
gaggagaatgatgaagacagttatgcgagggctatcataaataaagttaacaaatctact
gctagaaagaggaagttctctgattttgatgggcaacttctagcagctgatacaagtttg
cgggctttaaagaaaatgacagaagagaagttgaagaaaccaccatcagactctacagat
ggtattctttctaatgaagacttccaaagaatcaaggaacttacggccaagaaggatgcc
aggattgctttaaatcggcaaggatttaaggttccaagttctgatgatctgagtgctaag
cgggtggatcctgctacgcttgaagttcatgtacgggcgaggctaaacaaggaagaaaga
ttagcgctggtgagagcagggagagaggatagagagagctacaaatctagaatcgccgta
aaacagaaaaagactggcgggcagagcaacaggcagaaagaacacaaaaagcagatgcct
cttgctgcaaaaagggccaaggtagcaagatctcgacaagagaaaaagaaaaagcaaagc
ctttctggcaagcagttccgggggaagaaagcatggaaatga
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