Populus trichocarpa (black cottonwood): 7473198
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Entry
7473198 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7473198
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7473198
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7473198
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Ferritin-like
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7473198
NCBI-ProteinID:
XP_006379955
UniProt:
U5G8G3
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All DBs
Position
8:complement(12720053..12725231)
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AA seq
473 aa
AA seq
DB search
MGGKSSKGSRGRDYSSYGSANSSSSWNQYGYPPASSYPSPQHDPYWTQQHHHAPAPNPSY
PYESQMPPQQPHKRLDRKYSRIADNYQTLDQVTAALAQAGLESSNLIVGIDFTKSNEWTG
ARSFNRRSLHDIRNGQNPYEQAISIIGRTMSAFDEDNLIPCFGFGDASTHDQDVFSFFPE
ERFCNGFEEVLTRYKEIVPNLRLAGPTSFAPVIEMAITIVEQGGGQYHVLLIIADGQVTR
SVDTHHGQLSPQERRTIDAIVKASEYPLSIILVGVGDGPWEMMREFDDNIPARAFDNFQF
VNFTEIMSKNVSQSRKEAEFALAALMEIPSQYKATIELGLLGNHHRGNAPERVPLPPPLY
GQTSSSKSKASRSSSFQQRVPSYSAYDTPVSGYETTAEKASSLYDTPVSGYETTAERASS
SSSVYDNQVCPICLTNPKNMAFGCGHQTCCDCGEDLQVCPICRGPIQARIRLY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtaaaagctcaaaagggtcaagagggagagattattcttcttatggttcagcc
aattcttcatcttcatggaatcaatatggatatcctccagcatcatcatatccatctcct
caacatgatccctattggacacaacaacatcaccatgcacctgctcctaatccatcttat
ccttatgaatcacaaatgcccccccaacaaccacacaagaggctggacaggaaatactcg
agaatagctgataattaccagactttggatcaggtgactgctgctcttgctcaagctggc
ttagagtcttctaatctcattgttggaattgacttcacaaaaagcaatgagtggacaggt
gcaagatcattcaatcgacgaagcttacatgatattagaaatggtcaaaatccgtatgaa
caagcaatatcaattattggcaggactatgtctgcattcgatgaggataacttaattcca
tgttttggatttggagatgcatctacacatgatcaagatgtctttagtttctttcctgaa
gagagattctgtaatggatttgaggaagtgctgacacgatacaaagaaattgttcccaac
cttcggctcgctggaccgacatcttttgcacctgttattgaaatggccattactattgtt
gagcaaggtggtgggcaataccatgttttactgataattgctgatggacaggtgactaga
agtgttgacacacatcatggccagctcagtccacaagagagaaggacaatcgatgcaatt
gtaaaggcaagtgaataccctctatcgatcattttagttggagttggtgatggaccttgg
gagatgatgagggagtttgatgacaacatccctgctcgagcctttgacaatttccagttt
gtgaattttacagaaataatgtccaaaaatgtgagtcagtccagaaaagaggcagaattt
gctcttgcagcattgatggaaataccttctcaatacaaagcaactattgagcttggctta
ttgggcaatcaccacagagggaatgcaccagagagggttcctttgcccccaccactttac
ggtcaaacttcttcaagcaaatcaaaagcttcccgttcaagcagcttccagcagcgtgta
ccttcttactctgcatatgatacaccagtaagcggatatgaaacaacagcagagaaggct
tcatctttatatgatacaccagttagtggatatgaaacaacagcagagagggcttcatct
tctagctctgtgtatgataatcaggtttgccccatttgtctcactaatccaaagaacatg
gccttcggttgtgggcatcagacttgttgtgattgtggagaagacctccaagtgtgcccc
atatgtcgaggcccaatacaggctagaatcaggctctattag
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integrated database retrieval system
