Populus trichocarpa (black cottonwood): 7473606
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Entry
7473606 CDS
T01077
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7473606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7473606
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
7473606
Prokaryotic type
Archaeal type
TFB
7473606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
7473606
NCBI-ProteinID:
XP_002308933
UniProt:
B9H9K1
LinkDB
All DBs
Position
6:complement(3320556..3324989)
Genome browser
AA seq
312 aa
AA seq
DB search
MGDAFCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRIFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEAGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF
DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWY
ANEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgctttctgttcagattgtaagaaacacacagaggtagtatgcgaccattca
gcaggagacacagtgtgttcagagtgtggtcttgtcttagaatctcactcgatcgatgaa
acatcagagtggagaatctttgcgaatgaatcaggagataatgatccagttcgtgtcggt
ggacctactaatcctttgttaacagacggtggcctttctactgttattgctaaacctaat
ggtgcttccggagatttcttgtcgacttctcttggtcggtggcagaaccgtgggtccaat
cctgatcgtgggttgattctggcttttaaaaccattgcaaccatgtctgacaggttgggc
cttgttgcaacaatcaaggatcgggctaatgagatctataagaaggtggaggatcaaaag
tccagtagaggaaggaatcaggatgctttattggctgcttgcctctatattgcttgtcga
caagaagacaagccccgaaccgtaaaggaaatttgctctgtcgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttggaggcaggtcag
tctgtggagatgggaactatacatgctggggattttatgagacgtttctgttccaatctt
ggaatgtctaatcatacagttaaagctgccacagaagctgttaagacgtcagaacagttt
gatataaggaggagtcctatatcaatcgcagcagctgttatttatataataactcagctt
tcagacgacaagaagcctctccgagatatttcactagcaactggagttgctgaaggaaca
atcaggaattcgtacaaggatctttatccccacgtatcaaagataataccagcatggtat
gcgaatgaggaagatctgaagaaccttagcagtccttga
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integrated database retrieval system
