Populus trichocarpa (black cottonwood): 7473610
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Entry
7473610 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: heat stress transcription factor B-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7473610
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7473610
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GFIT
Motif
Pfam:
HSF_DNA-bind
IES5
LMBR1
Motif
Other DBs
NCBI-GeneID:
7473610
NCBI-ProteinID:
XP_002308023
UniProt:
B9H9T1
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Position
6:3398960..3401504
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AA seq
212 aa
AA seq
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MCVRHSSHYVDQVDEGGGQMGKEKLWEGTGFVXWQPAEFSRDLLPTLFKHSNFSSFVRQL
NTYGFRKVATSRWEFCNDMFRKGERELLRQIRRRKAWTNKQQPIAPLIQVAPQEFEEDQR
SSSTLSSSEYTSLVDENKRLKKENGVLSTELTSMKRKCKELLDLVAKNAHLEKEEEDERP
KLFGVRLEVEGEREKKRKRAEIRESATILLSQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttaggcacagttcacactacgttgatcaggtagatgagggaggtgggcaaatg
ggaaaagaaaagctgtgggaggggaccggatttgtgnngtggcagccggcagagttctct
cgtgatctcctaccaacactcttcaagcatagcaatttctctagctttgtccggcaactc
aatacttatggttttcgaaaagttgcaacgagccggtgggagttttgcaatgacatgttt
cggaagggagaaagagagctactacgccaaattcgtcgaagaaaagcttggactaacaag
caacaacctattgcaccgttaattcaagtcgcaccacaagagtttgaagaagatcaaaga
tcatcatccactttatcatcgtccgaatacacttctctagttgatgaaaataaacgactc
aagaaagaaaatggggtcttgagcactgagcttactagcatgaaaagaaagtgcaaggag
ctacttgatttagtagctaaaaacgcacatttggagaaagaagaggaagatgaaaggcca
aagttgtttggtgtgagattggaagtcgagggggagagggagaagaagaggaagagagca
gagattagagaaagtgcaaccattttactatctcaataa
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