Populus trichocarpa (black cottonwood): 7473613
Help
Entry
7473613 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7473613
KO
K14794
ribosomal RNA-processing protein 12
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7473613
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
Other 90S particles
7473613
Pre-60S particles
Other pre-60S particles
7473613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
GAPES2
RIX1
Motif
Other DBs
NCBI-GeneID:
7473613
NCBI-ProteinID:
XP_024459708
LinkDB
All DBs
Position
6:complement(3455895..3466567)
Genome browser
AA seq
1172 aa
AA seq
DB search
MKHKKPEPEPETQLKNDTEICQQLLSRYSASTAPQHRHLLATAAALRSILTAESLPLTPS
AYFAAAINNLSDSKTLDSTAIAALLSFVSIVVPLIEEKGIKDAKVKEAVAVLVEVAVERE
GVGVGSLGCVVKCLGVMILGFCDLEEWDSVKAGFESLIKFSVDKRPKVRRSAQDCLEKVF
KSFRSSSVVKEASKLVFSLFKNYMPVALTLSESRIFDESKEETLSKLEHLEVIHMLNLLK
VTVPYLSVKISSKVLPELVKLLRSDFSVLTRQIFQNIEAFFVSSSDEVIGPQQENIIDSL
SGYLSLGQKNPVDTVLSAATLLRTILNKLQAGGSSSWTSNGHKIFGSTAGLLTDEATASQ
ASDIMKELINHYIDPKEVEINESQSLDDSSQESEEANMIKSTCAVLENILNSCDGIPNEH
LLGVISVLFKKLGDISHIFMKNIVLKLADLMNDAGRDKPDTNHLQNCMGSAVVAIGPEKM
LMLVPISIDPDSFTCSNIWLVPILKDHVVGASLGYYMEHIVPLAKSFKQAGQKVRKSVIG
QDLQAHAHGLWGLLPAFCRYPVDTHKKFGALAELMITSLKKYSFMHQNIAVALQVLVNQN
RSVMLSKSDGGASNDNAVKDSVLECQNVATYSKKTATKNIKALTSCSSKLLHALADLFVD
SQSGKPSYIKDAIACLASISNSSVTQKVFMSLLKRFRFVTGEGEFQQPKSDGDELIEEEA
RSLNVQEKDVHRCVMMELASSLVVGAKTDFIDLIYNFVVFIFQATDVTGHCEAYHTLSRI
LQEHAWFCSSRFVELIDLLLGLKSPDDVATLKNRFACFHILIVHALEMTSEEKNTKAFLM
LNEIILILKDAREEARKVAYDTLLFISSSLRNSSCATSREAYQRLISMITGYLSGSSPYI
TSGAVSALSVLVYNDTEICLKVPDLVPSLLSLLQNKALEVIKAVLGFTKVLVSCLQAKDL
QNFLSDIIIGVLPWSSVSRNHFRSKVTVILEIMIRKCGSSAVELDIPEKHKSFFKTVLQN
RHHKSTSKEAGTNDTEKTPADISPKRVEKPKNKESGSVPERTGSAHPGKRKREKKHNEKP
PTSSKPGISTGDGSGREGAKRARHLEHEKSIKVRSEDGWKKRNFNKEQTGDGKRKMEHRN
TNKKGEASFRGPSSASKLHKPQKAWKKQKPNN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaaaacccgaacccgaacctgaaacccaattgaaaaacgacacagaaatc
tgccaacaactactctcccgatactccgcctctacagcaccacagcaccgccacctcttg
gcaactgccgccgcactccgatccatccttaccgccgaatcacttcctttaactccctca
gcttacttcgctgccgcaatcaacaatctctccgattcgaaaactctagattccacggca
attgcggcgttactttcgtttgtttcgattgtggtgcccttgattgaagagaaggggatt
aaggatgccaaggtgaaggaggcggtggcggtgttagtggaagttgcggtggagagagaa
ggagtgggagtggggagtttgggctgtgtggtgaagtgcttgggggttatgattttaggg
ttttgtgatttggaggagtgggattctgtgaaagcagggtttgaaagtttgattaaattc
tccgttgataagagaccaaaggtgaggaggagtgcacaagactgtcttgagaaggttttc
aagtcttttagatcttcttctgttgttaaggaagctagcaaattggtcttttcgttgttc
aaaaattacatgcctgtagcacttacattgagtgagtcaaggatttttgatgagtctaaa
gaagaaacattatcaaagctggaacatctagaggtcattcatatgctaaatcttctgaag
gttactgttccatatctctcggttaaaatcagttcaaaagttttgccagaactagttaag
cttttgaggtctgatttctcagtgctgacgaggcagatttttcaaaatattgaagcattt
tttgtgagttcaagtgatgaagtgattggtccgcaacaggagaacattatagattctctt
tctgggtatttatctctgggacagaagaatcctgtggacactgtattgtctgccgccacc
ctgctaagaactattttaaataaacttcaagccggaggatcaagctcttggacgagtaat
ggacataaaatttttggttctacagcaggtcttttgactgatgaggctactgcatcacag
gcttcagatataatgaaggagttgatcaaccactatatagatccaaaagaagtcgagatt
aatgaaagtcaatcacttgatgattcaagtcaagagagtgaagaagcaaatatgataaaa
tcaacatgcgctgtcttggagaatattctgaattcatgtgatggaattcctaacgaacac
cttttgggagtcatatctgttttgttcaagaagcttggagatatatcgcatatcttcatg
aagaacatcgtacttaagcttgcagacttgatgaatgatgctggtcgtgataaaccagac
acaaatcatcttcaaaattgcatgggatctgcagtggttgccattggtccggagaagatg
cttatgctcgtacctatctccattgatcctgacagttttacatgttcaaatatctggttg
gtacccatattgaaagaccatgttgttggagcttcgctagggtattatatggagcacatc
gtgcctcttgcaaaatcctttaagcaagctggtcagaaagttagaaaatcagtaattggt
caggatctgcaggctcatgctcatggcctctggggactgcttcctgccttttgtcgctat
cctgtcgatactcacaaaaagtttggagctttggctgaacttatgattacttctcttaag
aagtattccttcatgcatcagaatattgctgttgccttacaggttcttgtgaatcaaaac
agaagtgtgatgttgtctaaaagtgatggtggtgcctcaaatgacaatgcagtaaaagat
tctgttttagagtgccaaaatgtagccacttattccaaaaaaactgcaaccaaaaacatc
aaagctttgacatcatgttcttcaaagttgcttcatgctctagctgacttatttgttgat
tcacagtctgggaagccctcgtatataaaggatgctattgcatgcttggcttctatcagc
aattcttctgtcacccagaaagttttcatgtcactgcttaagaggtttcggtttgtaact
ggtgaaggtgagtttcaacagccaaagagtgatggtgatgaattgattgaggaagaagca
cgcagcttgaatgtacaagagaaagatgtacataggtgtgtgatgatggagcttgcatct
tctctcgttgttggagccaaaacagatttcattgatctgatatataactttgttgtcttc
atctttcaggctactgatgtaactggtcattgtgaagcataccacactctgagcagaatt
ttacaggaacacgcatggttttgttcttctcggtttgtggagctgattgacttattactt
ggcctgaaatctcctgatgatgttgcaactcttaaaaatcgatttgcttgtttccatatt
ctcatagttcatgcattagagatgacctcagaggagaaaaatacaaaggcttttcttatg
ctcaatgagatcatactcatcttgaaggatgcaagggaagaagctaggaaagtggcttat
gatacactcctttttataagttcctccttgcgcaactcatcttgtgccacttctagagaa
gcttatcaaagactgatcagcatgataacaggctatctctctggttcgtctccctacata
acaagtggagcagtatctgcactgtctgtactagtatataatgatacagaaatctgtctt
aaagtgcccgatcttgttccctctctcttatcattgctgcaaaacaaagctctggaagtc
ataaaagctgttttgggcttcacaaaagtattagtatcttgcttgcaagcaaaagacctg
cagaatttcctatctgacatcatcattggagttcttccctggtcatctgtctctagaaac
catttcagatcaaaggttacagtcatactggagattatgatacggaagtgtggttcttct
gcagttgagttagatatcccagagaaacataagagttttttcaagactgttttgcagaat
cgccatcataagtcaacttccaaggaagctggcacaaatgatacagaaaaaacgcctgca
gatatatcacctaagagggtggagaagccaaagaacaaggaatcgggttctgtacctgag
agaactggttcagcgcatcctgggaagagaaagagggagaagaaacacaatgagaagcct
cccacctcaagcaagcctggtatatcaactggtgatggtagcggacgtgaaggggctaaa
agagcgaggcacttagagcatgaaaaatcaatcaaggttcggtcagaggatggttggaag
aagaggaattttaacaaagagcaaactggtgatgggaaaagaaagatggagcataggaac
acgaacaagaaaggcgaagcgtcatttcgtggacctagttctgcttccaaattacacaaa
ccccagaaagcatggaagaaacagaaacccaacaactga
DBGET
integrated database retrieval system
