Populus trichocarpa (black cottonwood): 7474195
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Entry
7474195 CDS
T01077
Name
(RefSeq) protein CDC73 homolog
KO
K15175
parafibromin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7474195
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
7474195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
CDC73_N
Motif
Other DBs
NCBI-GeneID:
7474195
NCBI-ProteinID:
XP_002315762
UniProt:
B9HUU3
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Position
10:complement(11193601..11199274)
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AA seq
405 aa
AA seq
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MDPLSALRDFTIRGDLDKIIRINDEFRFGNEYTFPCSTKTAYRSKQGNLYTLETLVYCIQ
NTKIKFTNYLQDALALGIPPVTYIDWKPVKEYLSGKLSSTDSIVFPLPQESQNPNLNYRP
DDPMLLDSRIDDSAAADKVNNGNEGVENHVSLIYANERPLKDRESLLECKNRDFYGVLVA
STRREEERHKFESQQRKDGLVAKSRLMGTDERGIGYGGDELGYDSAAKPKMHSKGGKIGE
GVPIILVPSAFQTLITIYNVKEFLEDGIFIPTDVKAKQMKGPKPECVTVQKKFSTDRNRV
MTAYEVRDKPSALKGDDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSV
ESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSQSHT
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatccactctcagcactccgcgacttcaccatccggggtgacctagacaaaataatc
cgcatcaacgacgaattccgcttcggcaacgaatacaccttcccttgctcaactaaaacc
gcttaccgctccaaacaaggcaatctctacacactagaaaccctagtttactgcatccaa
aacaccaaaatcaagttcaccaattacctccaagacgccctcgctctcggcatcccccct
gtcacttacatcgactggaaacccgtcaaagaatacctctccggaaaactctcttctacc
gactccatagttttccctcttcctcaagaatctcaaaaccctaatcttaattaccgcccc
gatgatcctatgcttcttgattctcgaatcgatgattccgccgccgccgacaaggtgaac
aatgggaatgagggagttgaaaatcacgtttctttgatttacgccaacgagaggccgttg
aaggatagggagtcgttgttggagtgtaagaatagggatttttatggggttttggttgct
tccacgcgccgtgaagaggagaggcataaatttgagagtcaacagaggaaagatgggtta
gtggcgaagagtaggttgatgggaactgatgagagaggaattgggtatggtggtgatgag
ttgggctatgattcagcggccaagcccaaaatgcattcgaaaggagggaaaattggggag
ggggtgcccataattttggtgccaagtgcgtttcagactttgattacgatttataatgtg
aaggaatttttggaagatgggattttcataccgacggatgtgaaggctaagcagatgaaa
gggccgaaaccggaatgtgttacagtgcagaagaagtttagcactgataggaatagagtg
atgacggcttatgaggtgcgggataagccgtctgcactcaagggtgatgactgggatagg
gttgtggcagtttttgtgctggggaaggagtggcaattcaaggattggccctttaaggat
catgttgagatatttaataaaattattggatttttcatgcggtttgaagatgatagtgtg
gagtctgctaagattgtgaagcagtggaatgtaaagattatctcgatcagcaagaacaag
aggcaccaggatagggctgcagcgttggaggtgtgggaccgactagaagaatttgtgcgc
tcacaatcacacacttga
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integrated database retrieval system