Populus trichocarpa (black cottonwood): 7474224
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Entry
7474224 CDS
T01077
Name
(RefSeq) RAN GTPase-activating protein 2 isoform X2
KO
K14319
Ran GTPase-activating protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7474224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7474224
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
7474224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_8
LRR_NXF1-5
NPIP
Motif
Other DBs
NCBI-GeneID:
7474224
NCBI-ProteinID:
XP_002314715
UniProt:
B9HV83
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All DBs
Position
10:11601659..11604940
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AA seq
540 aa
AA seq
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MDATESKSQPRPFSIKLWPPSQNTRQMLVVRVTDNLTTKSIFTQKYGSLSKEEAEENAKK
IEDGAFSTANEHYEKEPDGDGSSAVQLYAKECSKQILEVLKRGPSSKDDKEVLVSEEVSA
PRDTVFDISKGARSFIEEKEAEETLEPLKEPGNSYTKICFSNRSFGLEAARVAEPILASI
KNQLKEVDLSDFIAGRPEAEALEVMNIFSTALEGSILKSLNLSNNALGEKGVRAFGALLR
SQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTGDKGALAISKVVKRSPL
LEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEV
YLSYLNLEDEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLA
ENELKDEGAIQISKVLEEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKFLNIDGNF
ISDEGIDEVKEMFEKFPDRLGSFDENDPEGGDDEEESGEGEGDEHELETKLEKLEVNKEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatgccactgagtcaaagtcacagccccgaccattttcaataaagctgtggccccct
agtcagaacacaaggcaaatgcttgtggttcgtgttactgacaatctcactactaagtcg
attttcacccagaaatatggcagtctgagcaaggaggaggctgaggagaatgcaaaaaaa
atcgaagatggtgctttttctactgcaaatgaacactatgaaaaggagccagatggtgac
ggaagttctgcagtacagctttatgccaaggaatgcagcaagcaaatcttggaagttctc
aaaagaggcccttctagtaaggacgacaaagaagttttggtgtccgaagaagttagtgca
ccccgtgacaccgtgtttgatatatctaaaggtgcgcgatcctttattgaggagaaggag
gccgaggaaacacttgagccattaaaagagccaggaaattcttacactaaaatatgcttt
agcaatagaagctttggtctagaagcagctcgtgttgctgaacccattctggcctccatt
aagaatcagctgaaggaagttgacctgtcagattttattgctggaagaccagaggcagaa
gcacttgaagtaatgaatatattctccactgctttggaaggtagcattctcaagtccttg
aacctttcaaataatgccttgggtgagaagggtgttagggcttttggggcactccttagg
tcacagagttgcttagaggagctctacttaatgaacaatggcatctcagaggaagctgct
gaagcggtctgtgaattaattcctttgacagagaagcttagggttcttcagtttcataac
aatatgactggagacaaaggagcacttgccatctctaaggttgtgaagcgctctccctta
ctggaagattttcgatgttcctccacaagggtaggctctgaaggaggagttgccttatca
gaagctcttgacacttgcacccatttgaagaagcttgatttgcgagacaatatgtttgga
gtggaagcaggagttgctctgagtaaagctctttccaaatatgctggtttgacagaagtt
tatttgagctatcttaatttggaagatgaaggtgccatggctatagctagagctctaaag
gaatcagctccctcactggaagtcctggatatagctggaaatgacataacagctgaagct
gctcctattgtagctgcttgtatagcagagaagcaacatcttaccaagttgaacttggct
gaaaatgaactcaaggatgaaggtgctatccagatcagtaaggtcttggaagaaggccat
ctccagctgaaggaagttgatatgagcatcaattctatacgaagggctggggctcgagtc
ttggcaagggtagtggtgcagaagcctgagtttaaatttctgaatattgatgggaatttt
atttcagatgaaggcattgatgaggtgaaggaaatgtttgagaaattcccagataggctt
ggatcctttgatgagaatgatcctgaaggaggtgatgatgaggaagagtctggagaaggt
gaaggtgatgagcatgagttggaaacgaaactggagaaacttgaagttaacaaagaggaa
taa
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