KEGG   Populus trichocarpa (black cottonwood): 7474232
Entry
7474232           CDS       T01077                                 
Name
(RefSeq) cullin-3A isoform X1
  KO
K03869  cullin 3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7474232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7474232
   03400 DNA repair and recombination proteins [BR:pop03400]
    7474232
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     7474232
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     7474232
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B
Other DBs
NCBI-GeneID: 7474232
NCBI-ProteinID: XP_002315795
UniProt: B9HV99
LinkDB
Position
10:complement(11770782..11775256)
AA seq 733 aa
MSNQKKRNFQIEAFKHRVVVDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYNGLVATMTSHLREISKSVEAAQGDSFLEELNRKWNDHNKALQMIRDILMYM
DRTYIPSTHKTPVHELGLNLWRDNIIHSSKIQTRLQNTLLELVHRERTGEVIDRGLMRNI
VKMLMDLGSSVYQEDFEKPFLEVSAEFYRGESQKFIECCDCGDYLKKAEKRLNEEIERVT
HYLDSKSEVKITNVVEKEMIANHMLRLVHMENSGLVNMLLDDKYEDLGRMYNLFRRVPNG
LSTIREVMTSHLRETGKQLVTDPERLKDPVEFVQRLLDEKDKYDSIISNAFNNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLKGVSEEDVEIILDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYA
SHVELGDARTLVVQVLTTGSWPTQPGVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTN
MGTADVKATFGKGGQKHELNVSTYQMCVLMLFNNAERLSYKEIEQATEIPAADLKRCLQS
MACVKGKNVLRKEPMSKDIGEEDVFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIITEVTKQLQSRFLANPTEIKKRIESLIERDFLE
RDSVDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagcaatcaaaagaagaggaatttccagatagaggcgtttaaacaccgggtcgtggtg
gatccgaaatacgccgataagacctggaagattttggagcacgctatccatgagatttac
aatcataatgctagtggtctcagtttcgaagagctctatagaaatgcctacaacatggtg
ctccacaaatttggcgagaagttgtataatggtctggttgctactatgacttcacattta
agagaaatatcaaaatctgttgaggctgctcaaggggattcgttcttggaggagctgaac
aggaaatggaatgatcataacaaagcattgcaaatgatcagggacatattgatgtatatg
gatagaacatatattccaagtacgcataaaacccctgttcatgaacttgggcttaacttg
tggagggataacataatacactccagcaaaattcagacaaggcttcaaaatacacttctt
gaactggttcacagggaacggactggtgaagttattgaccgaggtttgatgaggaacatt
gtcaagatgctaatggatctaggctcttctgtttaccaagaagactttgagaagccattt
cttgaggtttcagccgagttttataggggtgaatctcagaagttcattgagtgctgtgat
tgtggtgattatctgaagaaagctgagaaacgtttaaatgaagagatagagagagtgact
cattatttggattccaagagtgaagtcaagataactaatgtggtggagaaggagatgatt
gctaaccacatgctgagactagtccacatggagaattcaggcttggtaaacatgcttctt
gatgataaatatgaagacttgggacggatgtacaacctgttccgccgggttcctaatggt
ctttcaacaataagagaagtgatgacttctcacctcagggagactggcaagcaacttgtt
actgatccagaaaggttgaaggatccagtggaatttgttcagcgtttgttggatgaaaaa
gacaagtacgatagcatcataagcaatgcatttaacaatgacaagacattccagaatgct
ttgaactcctcttttgaatatttcattaatttgaatgctcgttctcctgagttcatttca
ttgttcgtggatgacaaactacgcaaaggtctaaaaggagttagtgaggaggatgttgag
atcattcttgacaaggtgatgatgctgttccgctatttgcaggagaaagatgtattcgaa
aagtattacaagcagcatttggctaagcggctgttgtcagggaaaacggtctctgatgat
gcggagagaagtctgatagtcaaacttaagacagaatgtggataccagttcacttcgaaa
ttagaaggcatgtttacagacatgaaaacctcccaggatacaatgcaagggttttatgca
agccacgtggagctaggggatgcacggacactggttgttcaggttttgacaacagggtct
tggcccactcaacctggtgttacatgcaacctgcctgcagaaatgtcagcactatgtgag
aagttcaggtcatattaccttgggacccatactggtcggagattgtcatggcaaactaat
atgggcacagcagacgttaaagcaacctttgggaagggtggtcagaagcacgagttgaat
gtctccacttaccaaatgtgtgttctcatgctgtttaataatgctgagaggcttagctac
aaagagattgagcaggcaactgagattcctgccgcagacttgaagaggtgcttgcaatcc
atggcttgtgtgaagggaaagaatgttcttcgcaaagaacccatgagtaaagacattggt
gaggaagatgttttttttgttaatgacaaattcacaagcaaattctataaggtgaagata
ggaactgtagttgcacagaaggaatcagaacctgaaaagcaggagacgcggcagagagta
gaggaggaccggaagcctcagatagaagctgcaatagttaggattatgaagtcgaggagg
gtattggatcacaacaatataatcactgaggtcacaaagcagttgcagtcacgtttccta
gcgaaccccacagagattaagaaaaggattgaatcccttatagaacgagatttcttggag
agggatagtgtggacagaaaactgtatcgatatcttgcttaa

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