Populus trichocarpa (black cottonwood): 7474439
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Entry
7474439 CDS
T01077
Name
(RefSeq) elongator complex protein 4
KO
K11375
elongator complex protein 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7474439
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
7474439
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAXNEB
ATPase
DUF7125
Motif
Other DBs
NCBI-GeneID:
7474439
NCBI-ProteinID:
XP_024465466
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Position
10:complement(18548846..18553361)
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AA seq
363 aa
AA seq
DB search
MAATKTRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIM
EDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQ
EKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDSP
NLATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKMDWDMLSFIRSLKSMLR
SANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIPDEDKELGKLLTGYQDMVGFLNVH
KIARINTQVPMILEATTFSIKLHKRRFLVLECLNQAPIDGSSGTSYGTSGGCSGSSRSGA
LDF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactaagacccgaataagcagcttctctcgcaatatatcagctgtgtctgct
cctcagttgcctggaataaagtgcggtcctaatggcacattctttgtttcatctgggata
cctgaccttgacaagatactgggtggtgggtttcctttgggaagcttagttatgataatg
gaagatgcggaagctcctcatcacatgctgttattgaggaatttcatgtctcaaggactt
gttcaaaaccaacctcttctttatgccagtccagctaaagaccctagagggtttttgggt
actttgccttgcccctcatcatctaaagatgataaatcccgtaatcatgatacagaacag
gaaaagggactgagaattgcttggcagtataaaaagtatttcagtgaaaatcagaaaaat
attgatgatcataaagatagtaatcaagagttttgcaatgattttgacttgcggaaacca
ttggagaagcatttttacagtgggcagcgtgtagactgtgtcagcatcaaagattctcct
aacctggccactcttcatgaccgttgtgccacatttttagctcaatttccaagaaatgat
ggaagcttttcttgcatgggtcgtattgctattcagtcattatgtgctccacaatgtgaa
ctttccaaaatggactgggatatgctttccttcattagatctctcaaaagcatgctacgg
tctgcaaatgcagttgctattattacatttccatcttcccttctttcaccatccttctgt
aaaagatggcagcacatggcagatgtgttactgtctgtcaaagcaatcccagatgaggac
aaggaattgggaaaactcctaactggttaccaagacatggttggcttccttaatgtgcac
aaaatagcacgtatcaatactcaggttcccatgattcttgaggcaacgactttctcaata
aaattgcataagcgacggtttttagttttagaatgtctaaatcaagcccccattgatggt
tcaagtgggacttcatatggcacatctggtggctgttctgggtcctccagaagcggtgcc
cttgatttttag
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