Populus trichocarpa (black cottonwood): 7474634
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Entry
7474634 CDS
T01077
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7474634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7474634
03036 Chromosome and associated proteins [BR:
pop03036
]
7474634
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
7474634
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
7474634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_Aladin
DSE1_N
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_VPS8
Beta-prop_SCAP
Ge1_WD40
TRM82_WD
WDR90_beta-prop_4th
ASA1
Beta-prop_SPT8
Beta-prop_RIG_1st
RMC1_N
Tricorn_2nd
WDR54
CFAP43_N
DPPIV_N
Kelch_1
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
7474634
NCBI-ProteinID:
XP_002319120
UniProt:
B9I5Q9
LinkDB
All DBs
Position
13:3510290..3512701
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSINSSSSLKAQSRFPLQQQFLPRMNSKENLDRFIPNRSAMDMDYAHFMLTEGRKGK
ENPTVNSPSREAYRKQLAESLNMNRTRILAFKNKPPAPVELMPQDHSHHHHQPKTAKPRR
HIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVYLWDASDGSTSELVTVDDED
GPITSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGGHRSRVGSLAWNNHILTTGG
MDGQIINNDVRIRSHIVETYRGHTQEVCGLKWSASGQQLASGGNDNLIHIWDRSTALSNS
ATQWLHRLEDHTSAVKALAWCPFQGNLLASGGGGGDKSIKFWNTHTGACLNSIDTGSQVC
SLLWNKNERELLSSHGFTQNQLTVWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVATAAG
DETLRFWNVFGVPEVAAKAAPKANPEPFSHLNRLR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggtctattaactcttcttcaagcttgaaagcacaatctcgtttccctctt
caacagcagtttcttcccagaatgaactctaaagaaaacctggatagatttattccaaac
cggtcagccatggatatggattatgcccatttcatgttaacagaagggagaaaagggaaa
gagaatccaacagtgaactcaccgtcaagagaggcttacaggaagcaacttgctgaatcc
ttgaacatgaaccgaactcgaattctagctttcaagaacaagcctcctgcacctgtcgag
ttgatgcctcaagaccactctcatcaccaccaccagcccaaaaccgccaagcctcgccga
catattcctcagacttctgagaggacactggatgcaccggatcttgtggatgatttctac
ctcaacttattggattggggcagcagcaatgttttagccatagctcttggaagcactgtt
tatttgtgggatgcttcagacggttccacctcagaattggtcacggttgatgatgaagat
ggacccattaccagtgtcaattgggctcctgatggacgccatattgccataggcttgaac
aattctcacatacagttatgggattctgcttccaatagacagctaagaacattgaaagga
ggccacagatcgcgagtggggtcattggcatggaacaatcacatcctgacaacaggagga
atggatggtcaaatcattaacaatgacgtgagaattagatcacacattgttgagacttac
agaggtcatacacaggaggtttgtgggcttaaatggtccgcttcaggtcaacaattagca
agtggaggcaatgataatctaattcatatatgggatagatctacagcattatcaaactca
gcaacacagtggcttcacaggcttgaggaccatacttcagcagtgaaagccctggcatgg
tgtcctttccaagggaatttgctagcctctggaggaggtggaggagataagagtattaag
ttttggaatacacatacaggtgcctgcttgaactcgattgataccggatctcaggtttgt
tctcttttgtggaacaagaatgaaagggaactacttagctctcatgggtttactcagaat
caactcactgtttggaaatatccatcaatggtgaaaatggcagagctcactggccatact
tctagagtcctttacatggctcagagtccggatggttgcacagtggcaacagcagcagga
gatgaaacgttaagattttggaatgtttttggagttccagaagtggctgctaaagctgct
cctaaagcaaatcccgagccattttctcacttgaatcgccttcgctga
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