Populus trichocarpa (black cottonwood): 7474693
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Entry
7474693 CDS
T01077
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04016
MAPK signaling pathway - plant
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
7474693
04075 Plant hormone signal transduction
7474693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7474693
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7474693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_6
LRR_4
F-box-like
F-box
DUF8346
Motif
Other DBs
NCBI-GeneID:
7474693
NCBI-ProteinID:
XP_002308982
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All DBs
Position
6:complement(5018385..5022369)
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AA seq
656 aa
AA seq
DB search
MPTLVNYSGDDEIYSGGSFYTNPSDLGRLYSIVSNVDVYSPACKRARISAPFLFESSGFE
QNMRPSIEVLPDECLFEIFRRVPEGKERSSCASVSKKWLMLLSSIRRSEFCNSNPVAEEE
NETAAPVCNDVEMVSCEDNGEVESDGYLTRSLEGKKATDMRLAAIAVGTSSRGGLGKLLI
RGSNSVRGVTNRGLSAIARGCPSLRALSLWNVPFVGDEGLFEIAKECHLLEKLDLSNCPS
ISNKGLIAIAENCPNLSSLNIESCSKIGNEGLQAIGKLCPRLHSISIKDCPLLGDHGVSS
LLSSASSVLTRVKLQGLNITDFSLAVIGHYGKAVTNLSLSVLQHVSERGFWVMGNAQGLQ
KLMSLTITSCRGITDVSLEAIAKGSLNLKQMCLRKCCFVSDNGLVAFAKAAGSLESLQLE
ECNRITQSGIVGALSNCGTKLKALSLVKCMGIKDMALGMPVPSPCSYLRFLSIRNCPGFG
SASLAVVGKLCPQLQHVDLSGLCGITDSGILPLLESCEAGLVKVNLSGCMSLTDEVVSAL
ARLHGGTLELLNLDGCRKITDASLVAIAENCLFLSDLDLSKCAVTDSGIAVMSSAEQLNL
QVLSLSGCSEVSNKSLPCLKKMGRTLVGLNLQKCSSISSSTVELLVESLWRCDILS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcttgttaactacagtggagatgatgaaatctattctgggggctctttctat
acaaatccttccgaccttggtcgattatattcaattgtatccaatgtggatgtatacagc
cctgcttgcaagcgagctcgcattagtgctccttttctctttgaatcatctgggttcgag
cagaatatgcgaccatcaattgaagttcttccagatgaatgcctttttgagatcttcaga
cgcgttcctgaaggcaaagagaggagttcctgtgcctctgtgtccaagaaatggcttatg
cttttgagcagcatcaggaggtctgaattttgcaacagcaaccctgtagctgaagaagaa
aacgaaacagcagctcctgtttgtaatgatgttgaaatggtctcttgcgaagacaacggg
gaagttgagagtgatggttaccttaccaggtccttggaaggaaagaaagcaacagatatg
agactggctgccattgctgttgggacaagtagccgtgggggcctgggcaagctgttgatc
cggggaagcaactctgttcgtggggttaccaaccgtggtctatcagcaatagcacgtggt
tgcccttctctaagggctctttctttgtggaacgttccttttgttggggatgaaggtcta
tttgagatcgccaaagaatgccatttgttggagaagcttgacctttccaactgtccttca
atttccaacaagggtttgattgcaattgctgagaactgccctaatttgagctctttgaat
attgaatcttgttctaagattggtaacgaaggcttgcaggcaatcggaaagctgtgccct
aggttgcattcaatctctattaaagactgccctcttcttggggatcatggagtatcaagt
ttattatcttcagcttcttctgtattaacaagggtgaagcttcagggtttgaacatcaca
gacttctctcttgctgtaattgggcactatgggaaagctgttacgaatctttcccttagt
gttctccagcatgttagtgagagaggcttttgggtcatgggtaatgctcagggtttgcaa
aaattaatgtctttgacaattacttcatgccgggggataacagatgtgagtcttgaagct
attgcaaagggttccttgaatctgaagcagatgtgcctccgcaagtgctgctttgtgtct
gataacgggttggttgcttttgccaaagctgccggatctcttgagagcctgcaattggaa
gaatgtaacagaattacccagtcagggatcgttggtgcactttcaaactgtggaacaaag
ttgaaagctcttagtcttgtgaagtgcatgggaattaaggatatggcactcggaatgcca
gtgccctctccttgcagctatcttcgatttttgtcaattagaaattgcccaggatttggc
agtgcgagcttggctgtggtagggaagctgtgccctcaacttcagcatgttgacctaagt
gggctttgcggaattacagattctgggattctgccactgttagagagttgtgaggcaggt
cttgttaaggtgaatcttagtggttgcatgagtttgaccgatgaagtagtttcagccttg
gctaggctacatggtggaacccttgaattgctgaatctggatggttgcagaaagatcact
gatgctagcttggtagcaattgctgaaaattgtctgtttctcagtgacctagatctgtca
aagtgtgcagtcactgattctggcattgctgtcatgtcaagtgcagagcagctcaatctt
caagtcctatccttgtcaggatgttctgaagtatcaaacaagagcttgccttgcctaaag
aaaatgggcaggaccctggtggggttgaacctccaaaaatgcagttcaattagcagcagc
acagttgagctgcttgtagagagcctgtggagatgtgatatcctttcataa
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