Populus trichocarpa (black cottonwood): 7474835
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Entry
7474835 CDS
T01077
Name
(RefSeq) TPR repeat-containing thioredoxin TDX isoform X1
KO
K09560
suppressor of tumorigenicity protein 13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7474835
04131 Membrane trafficking [BR:
pop04131
]
7474835
Chaperones and folding catalysts [BR:
pop03110
]
Other chaperones and cochaperones
Others
7474835
Membrane trafficking [BR:
pop04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Co-chaperones
7474835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
HipN
TPR_1
TPR_2
TPR_11
TPR_9
TPR_17
Thioredoxin_2
OST3_OST6
Thioredoxin_8
TPR_8
TraF
Thioredoxin_9
TPR_16
Glutaredoxin
TPR_19
AhpC-TSA
EAD11
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
7474835
NCBI-ProteinID:
XP_024442678
LinkDB
All DBs
Position
15:3029197..3033724
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AA seq
386 aa
AA seq
DB search
MFQMDAAKVTELKHFIDQCKANPSIIHTPSLAFFKTYLQSLGARFPPETKSGAHMQEKGD
IDMADSGEYSDSKRPIEDDDEIVESDIDLDNTDVVEPDNHPPQKMGDPAVEVTEEKRDAA
KTEKSKAMDAISEGKLEEAIDHLTEAITLNPTSAILYATRGSVFVKLKKPLAAIRDADAA
LAINPNSAKGYKVRGMARAILGQWEQAATDLHEASKLDYDDEIGLVLKKVEPNARKIEEH
RRKYERLRKERELKKAELERKQQAEAQEREALSALKEGQVIGIHSAKELDPKLNAASRTS
RLAILYFTASWCGPCRMIAPIFTSLAAKYLKVVFLKVDIDEARDVAARWNISSVPTFYFI
KNGKEIDKVVGADKNELERKVKQHSG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttccagatggatgccgctaaagtaactgagctcaaacactttattgatcagtgtaag
gctaacccttctattatccacaccccatctcttgctttcttcaagacttatcttcaaagc
ctaggtgctcgatttcctccagagacaaaatcgggtgctcatatgcaggagaaaggtgat
attgacatggctgactctggggaatactctgattccaaaagaccaattgaagatgatgat
gaaattgttgagtctgatattgacttggataatactgatgtcgtggaacctgacaatcat
cctccacaaaagatgggagatcctgcagttgaagttacagaagaaaagcgggatgctgct
aaaaccgaaaaatcaaaagctatggatgcaatctctgaaggtaagctggaagaagccata
gatcatttaacagaagccatcacgttgaatccaacttcagctatattatatgccacacga
ggtagtgtttttgttaaactgaagaaacctcttgctgcgattcgtgatgctgatgccgct
ctagcaatcaatccaaactctgcaaaaggatataaagtacgaggtatggccagagccata
ttgggccaatgggaacaagcagcaactgacctgcatgaggcgtcaaagttggactatgat
gatgagattggtttggtgctgaaaaaggttgaacctaatgcccgcaaaattgaagagcat
cgtagaaaatatgaacgcctccgaaaagaaagggagctaaagaaagccgaacttgagaga
aaacaacaagctgaagcccaagaaagagaagccttatctgctctgaaggaaggacaagtt
ataggcattcattctgccaaggaactagatcccaaactgaatgctgcgtcaagaacttcc
cgccttgcaatcctgtacttcaccgcatcgtggtgcggaccatgtcgaatgattgctccc
attttcacaagcttagctgcgaagtacctgaaagttgttttcttgaaagttgacatagac
gaggcaagagatgttgctgcacgctggaacatcagcagtgttcctaccttctactttata
aagaatggcaaggagattgacaaggttgtgggggctgataaaaatgaattggaaaggaag
gttaaacaacattctggctag
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