KEGG   Populus trichocarpa (black cottonwood): 7474860
Entry
7474860           CDS       T01077                                 
Name
(RefSeq) transportin MOS14
  KO
K15436  transportin-3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
pop03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    7474860
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7474860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pop03016]
    7474860
Transfer RNA biogenesis [BR:pop03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    7474860
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd IBN_N CRM1_C HEAT_IPO9_c
Other DBs
NCBI-GeneID: 7474860
NCBI-ProteinID: XP_024442426
LinkDB
Position
15:9418580..9439858
AA seq 959 aa
MELQNSVKEALNALYHHPDDVFRMEADRWLQNFQRTIDAWQVADNLLHDATSNLETLIFC
SQTLRSKVQRDFEELPSEAFRPLRSSLNTLLKKFHRGPPKVRTQISIAVAALAVQVPPED
WGDGGIVNWLKDEMTSHPEYIPGFLELLTVLPEEVFNYKIAARPERRRQFENELTSQIEV
ALNILTACLKISELKEQVLEAFSSWIRLRHGIPGSVLACHPLVYTALSSLNSETLSEAVV
NVISELIHYTTAGNSGGIPVQMPLIQVIVPQVMSLKEQLRDSSKDEEDVKAIARLFADMG
DSYVELIATGSDESMIIVNALLEVASHPEYDIASMTFNFWHNLQHILTKRDSYTSFGNEV
SIEVERSRRLQVFHSAYESLVSLVSFRVKYPQDYQTLSVEDLKEFKQTRYAVTDVLIDAA
SVLGGDATLRILYVKLYEARTCLGNGHNQWHPAEAALFCIRAISNYVSTVEAEVMPKIMS
LLLELPHEPQLLQTVCLTIGAYSKWLDASSDGFPLLSSVIKVLLSGMSKSEDSAAAAAVA
FRHICDDCRRKLCGYFDELFSIYHSAVIEGGSFKVSAEDSLHMVEAFSMVITELPADQAK
QALEKLCLPVVTPLQEIISHGPEVLEKKPARELTVHIDRLAYIFRYVNHPEAVADAIQRL
WPILKAIFDIRAWDMQTMESLCRACKYAVRTSGRFMGITIGDMLEEIQGLFQQHHQPCFL
YLSSEVIKIFGSDPSCAYYLKILIETLFKCTTCLLTNIKDFTARPDIADDCFLLASRCIR
YCPQVFIPSTVFPSLVDCSMIGITVQHREASNSILTFLSDVFDLAKSTMGEQYLTIRDSV
IIPRGVTITRILVASLTGALPSSRLETVTYALVALTRAYGASALEWARGSVSLIPSTAVT
EVERINFCQALADAASGIDVNSLMAPIEELSDVCRRNRTVQEIVQGALRPLELNLVTVS
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggagcttcaaaattcagtgaaagaagctctaaatgcgctgtaccatcatccagacgat
gtgtttcgtatggaagccgatcgatggctacaaaactttcaacgcacaatcgatgcctgg
caggttgctgataatttgcttcacgatgccaccagcaatctggaaaccttaatattttgt
tctcaaactcttagaagcaaggtacaacgagattttgaagaactgccctctgaagccttt
cgaccattgcgtagttccttaaataccttgttaaaaaaatttcacagaggcccccctaaa
gtgaggactcagattagcattgctgtggctgccttggctgtacaagttcctcctgaggat
tggggggatggtggtattgtaaattggctcaaggatgagatgacttcacatccagaatat
ataccaggatttctggagttgcttacagttttaccagaggaagtattcaactacaagata
gctgctcgtccggaaagacgccgccaattcgagaacgagctcacttctcaaatagaggtc
gctcttaatattttgacagcttgcttgaaaataagtgagctaaaggagcaggttcttgag
gcattttcttcttggattcgactaaggcatgggatccctgggtctgtgcttgcttgtcat
ccattggtgtatacagctctatcaagtttgaattctgagaccctttcagaggcagttgta
aatgtcatatcagaattgatacattacacaacagctggaaactctggtggcattcccgtg
cagatgcctttaattcaagtgattgtgcctcaagtcatgagtctaaaggagcaactcaga
gattcttctaaggatgaagaagatgtgaaggccattgctagattatttgcagacatgggt
gattcgtatgtcgagctgattgcaactggttctgatgagtcaatgattattgtaaatgca
ttattagaagttgcttcacacccagaatatgatattgcttcaatgacattcaatttctgg
cacaatcttcaacatatcttgactaagagggattcctatacttcatttggcaatgaagta
tccattgaagttgagagaagtaggaggctgcaagtttttcactcagcctatgagtccctt
gtgtccctggttagctttcgagttaaatatcctcaagattatcaaaccctgtcagttgaa
gatctcaaggaattcaaacagacaagatatgctgtcacggatgtattaattgatgcagca
tcagttttaggcggtgatgcaactttgagaattctttacgtgaaactttatgaggcccga
acctgcttggggaatggacataatcaatggcatccagctgaagctgctctgttttgcatc
agagctatatcaaattatgtttcaacagtcgaagctgaagtaatgcccaagattatgtct
ttgcttttggaacttcctcatgagccccaattgctccagacagtgtgcttaacgattggg
gcatattcaaaatggcttgatgcgtcatcagatggatttcctctattgtcttcagtcatt
aaagttctgctgagtggcatgagtaaatcagaagattctgcagcagctgcggcagtggca
ttcagacacatctgtgatgattgccggagaaagctttgtggatattttgatgaactcttt
tccatataccacagtgctgtaattgagggaggtagttttaaagtttctgctgaggactct
ttgcacatggttgaagccttcagcatggtcattacagaacttccagctgaccaggctaag
caggcgttggagaaattatgcttgccagttgttactcctctacaggaaattattagtcac
ggtccagaagtattggagaagaaacctgctcgagagttaacagttcatattgatcgacta
gcatacatctttaggtatgtaaatcacccagaagctgtggcagatgcaattcaaaggctt
tggccaattttgaaagcaatctttgacattcgtgcttgggatatgcagacaatggagtct
ctttgccgagcttgtaaatatgctgtgagaacatctggaagattcatgggaatcacaatt
ggagatatgctagaagagattcaaggcctgttccagcagcaccaccagccatgcttcctt
tatctctccagtgaagttataaagatatttggttctgacccatcatgtgcgtactatctg
aaaattttgattgaaaccctcttcaagtgcacaacatgtcttctcaccaatatcaaggac
tttactgccagaccagacatagcagatgattgttttctgttggcatcgaggtgcattcgc
tattgccctcaagtatttattccatccactgtattcccatcattagtggattgctcaatg
attggcatcacagtacaacacagagaggcctccaattccatattaactttcttgtcagat
gtctttgatcttgcaaagtctaccatgggagaacaatatttaactatcagagacagtgtc
atcattccccgaggtgtcactatcaccagaattttggttgcctcattaactggagcactc
cctagttctcgattagaaacggtaacatatgctttagtagcactaactcgtgcatatgga
gcaagtgcactggagtgggccagggggagtgtttctttaattccatcaacagcagtcaca
gaagtggaacgaataaatttttgtcaagcattggccgatgcagcatctgggatcgatgtc
aactccctgatggctccaattgaggagctttctgatgtttgtagacgtaacagaacagtt
caggagattgttcaaggagctttaaggccgcttgagttgaatttggtcactgtatcatag

DBGET integrated database retrieval system