Populus trichocarpa (black cottonwood): 7474870
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Entry
7474870 CDS
T01077
Name
(RefSeq) E2F transcription factor-like E2FE isoform X1
KO
K09391
transcription factor E2F7/8
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7474870
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
7474870
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Gene cluster
GFIT
Motif
Pfam:
E2F_TDP
TrmB
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
7474870
NCBI-ProteinID:
XP_002321561
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Position
15:9589563..9593144
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AA seq
384 aa
AA seq
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MALSYTDIIDPPSRHHAYSRKQKSLGLLCTNFLTLYNRDDIDVIGLDDAASKLGVERRRI
YDIVNVLESVGVLARKAKNKYSWKGFASVPKALQDLKEEGLRDNVNTIDRQSNNSAKVAN
DDEDEDDDSDSNPNTGSQNENSSIIKSMAVSRSDHRREKSLGLLTQNFVKLFVCSNANLI
SLDESAKLLLGDGHNLSIMRTKVRRLYDIANVLSSLKLIEKTHTADTRKPAFRWLGFRGK
SENGSGDPLAPFESRKRTFGADITNTCFKRNKMDSSVDGDKSQNLKMQQIKDENMVTVAE
RGNFGQDLQQKSGSFQFGPFAPVSVAKAGNPEDNVTRIYDWEGLSSTFRPQYHNQALRDL
FSHYTEAWKLWYTEVAGKKPLHIS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcctataccgatatcatagatcccccttcaaggcatcacgcttatagcaga
aaacagaaatctctcggtctcttatgcaccaattttttgaccctgtataatcgagatgac
attgacgtgattggacttgatgatgcagcttctaaattaggagttgagagaagacggatc
tatgatatagtgaatgtcttggagagtgttggggttcttgcaagaaaggcaaagaataag
tattcatggaagggatttgcttcagtccctaaagctttacaagatttgaaggaagagggt
ttgagagataatgtcaatacaattgataggcaaagcaataattctgcgaaagttgcaaat
gatgatgaggacgaggacgatgactctgattctaatcctaacacaggaagccagaatgag
aattctagtattatcaaatctatggctgtgtcaagatctgatcatcggagagaaaagtcg
ttggggcttcttactcagaacttcgtgaagctctttgtgtgctccaacgcaaatttgatc
tcactcgatgaatctgccaagttattactaggagatggccacaatttgtcaattatgaga
acgaaagtaaggaggctatatgacattgcaaatgtgctgtcttctctgaaacttattgag
aagacccacactgctgatacaaggaaacctgcattcaggtggttaggcttcagaggcaaa
tcagagaacggatctggtgatcctttggctccttttgagtctaggaagaggacatttgga
gctgatatcacaaacacatgtttcaaaagaaacaaaatggattcttcagttgacggggat
aaaagccagaatctgaagatgcagcaaataaaagatgaaaatatggtaactgtcgccgag
agaggcaattttggtcaggatttacagcagaagtcgggaagtttccagtttggccccttt
gctcctgttagcgtggccaaagcgggaaaccctgaagacaatgtgactcgaatctatgat
tgggagggtctttcgtctacttttcgtcctcaatatcacaaccaagctctgagagatctc
ttttcccattacacggaagcatggaaattatggtacactgaagttgctgggaagaaacca
ttacacatctcctaa
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