KEGG   Populus trichocarpa (black cottonwood): 7474909
Entry
7474909           CDS       T01077                                 
Name
(RefSeq) DNA polymerase II subunit B4
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03030  DNA replication
pop03082  ATP-dependent chromatin remodeling
pop03410  Base excision repair
pop03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    7474909
   03410 Base excision repair
    7474909
   03420 Nucleotide excision repair
    7474909
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    7474909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    7474909
   03036 Chromosome and associated proteins [BR:pop03036]
    7474909
   03400 DNA repair and recombination proteins [BR:pop03400]
    7474909
Enzymes [BR:pop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     7474909
DNA replication proteins [BR:pop03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    7474909
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    7474909
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      7474909
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C AP3D1 Bromo_TP TAF
Other DBs
NCBI-GeneID: 7474909
NCBI-ProteinID: XP_002312821
UniProt: A9PCR2
LinkDB
Position
9:complement(12554723..12557024)
AA seq 145 aa
METEKVVAEAEELPKAIVRRVVKDTLSRCSPEDSDINVHKDALLAFSESARIFIHYLSAT
ANDICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKNGGKKVGSAQNKEVQK
KRKTGGPSKKSGGKSTPKKGDTGEK
NT seq 438 nt   +upstreamnt  +downstreamnt
atggaaacggagaaagtagtagcagaagcagaggagcttccgaaggctattgtgcgccgg
gtggtgaaggatactctttcccgctgctcccctgaagattctgacattaacgtccacaaa
gacgccctcctcgctttctccgaaagtgctcgcattttcatccactatctctctgccacg
gctaatgacatatgcaaggaatcaaagaggcaaacaatgaatgccgatgatgtgtttaaa
gcgcttgaagatatcgagtttcctgagtttgttgggcctctcaaagtctccctgagtgaa
tttaagcggaagaatggtggaaagaaggtagggtcagcacagaacaaagaggtgcaaaag
aagaggaaaacaggagggccgtcaaagaaaagtggaggtaaaagtacaccaaagaaaggg
gacaccggagaaaaatga

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