Populus trichocarpa (black cottonwood): 7474909
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Entry
7474909 CDS
T01077
Name
(RefSeq) DNA polymerase II subunit B4
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03030
DNA replication
pop03082
ATP-dependent chromatin remodeling
pop03410
Base excision repair
pop03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
7474909
03410 Base excision repair
7474909
03420 Nucleotide excision repair
7474909
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7474909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7474909
03036 Chromosome and associated proteins [BR:
pop03036
]
7474909
03400 DNA repair and recombination proteins [BR:
pop03400
]
7474909
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
7474909
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
7474909
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
7474909
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
7474909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
AP3D1
Bromo_TP
TAF
Motif
Other DBs
NCBI-GeneID:
7474909
NCBI-ProteinID:
XP_002312821
UniProt:
A9PCR2
LinkDB
All DBs
Position
9:complement(12554723..12557024)
Genome browser
AA seq
145 aa
AA seq
DB search
METEKVVAEAEELPKAIVRRVVKDTLSRCSPEDSDINVHKDALLAFSESARIFIHYLSAT
ANDICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKNGGKKVGSAQNKEVQK
KRKTGGPSKKSGGKSTPKKGDTGEK
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggagaaagtagtagcagaagcagaggagcttccgaaggctattgtgcgccgg
gtggtgaaggatactctttcccgctgctcccctgaagattctgacattaacgtccacaaa
gacgccctcctcgctttctccgaaagtgctcgcattttcatccactatctctctgccacg
gctaatgacatatgcaaggaatcaaagaggcaaacaatgaatgccgatgatgtgtttaaa
gcgcttgaagatatcgagtttcctgagtttgttgggcctctcaaagtctccctgagtgaa
tttaagcggaagaatggtggaaagaaggtagggtcagcacagaacaaagaggtgcaaaag
aagaggaaaacaggagggccgtcaaagaaaagtggaggtaaaagtacaccaaagaaaggg
gacaccggagaaaaatga
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