KEGG   Populus trichocarpa (black cottonwood): 7474938
Entry
7474938           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7474938
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7474938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7474938
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     7474938
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 7474938
NCBI-ProteinID: XP_024463818
LinkDB
Position
9:complement(11679034..11684502)
AA seq 468 aa
MGAYSNEELPLPPVSDFSNTRLSKHVHDNVHGNIYLDPLSLKFIDTEQFQRLRDLKQLGA
AHMVYPGAVHTRFEHSLGVYWLAGEAVQMLKKYQGLELGIDNFDIQTVKLAGLLHDVGHG
PFSHLFQSEFLPLVMNGTEWSHEQMSTKMVDHIVDKHHIDVDSEMMRKVKEMILASSGSA
PKNDAGEKRFLYDIVANGRNGVDVDKFDYIVRDSRACGLGCSFEFQRLMQTMRVMGDEIC
YRAKEYLTVHKLFATRADLYRTVYVHPKVKAIELMIVDALVEANDYLQISSFIEDPSEYW
KLDDSIIKTIETAPNQELRESRNLIRRIRTRNLYQFCNEYAVPRDKIENFKDVTAQDIVC
SQKNGGVLLKEEDVAVSNVRIDLTRGRHNPLERISFFKDYESEEKFSIPDDRISHLLPTC
FQDMIVRVYAKKPELVGAISEAFENFQLNKYGIKAQVHATPEKKKRRM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgggggcttatagcaacgaagaactcccactgcctccagtttccgatttttcaaatacc
cgactatccaaacacgttcacgataatgtccacggcaacatttacctcgatccgctctct
ttaaagttcattgatacagagcagtttcaaaggctgcgggacctgaaacaacttggtgct
gcgcatatggtttatcctggggctgtgcataccaggttcgaacattctctcggcgtgtat
tggcttgctggtgaagctgttcaaatgctcaaaaagtaccagggtctggagctaggtatt
gataattttgatattcagacggtgaaacttgcaggacttctacatgatgtgggtcacggt
cccttcagtcacttgtttcaatccgagtttctccctctggttatgaatggcacggaatgg
tcgcatgagcaaatgtcaacaaaaatggttgatcatattgttgataagcaccatatagac
gttgactctgaaatgatgagaaaagttaaggagatgatactagctagctcaggatcagca
ccaaaaaatgatgcaggtgagaagcgctttttgtatgatattgttgcgaatggtcgaaat
ggagttgatgtggacaagtttgattatattgtccgtgacagccgagcctgcggtctggga
tgcagttttgagtttcagaggttgatgcagacaatgcgagttatgggtgatgagatttgt
tatcgcgccaaggagtatctcactgtccataagttgtttgctactcgcgcggatctttac
cgtacagtttatgttcacccaaaagtaaaggctatagagctgatgattgtagatgccttg
gtggaagcaaatgattatctgcaaatttcatctttcattgaagatccttcagaatactgg
aagttagatgattcaataatcaaaactattgagacagctcctaaccaagaactaagggaa
tccaggaatttgatccgacgcatacgcacgagaaatctttaccagttttgcaatgagtat
gctgttccaagggacaagatagaaaatttcaaagacgtcactgcacaggatattgtttgt
tcccagaaaaatggcggggtgctactgaaggaggaggatgttgctgtaagcaatgtgagg
attgatttgactcgtggaaggcataatcctcttgaaagaatcagttttttcaaggattat
gagagtgaagaaaaattttccataccagatgatcgcatcagtcacctgctgcctacatgc
tttcaagatatgatagtcagggtctacgccaaaaagcctgaactggtaggagcaatctct
gaggcttttgaaaacttccagctaaacaagtatgggattaaggcgcaagtacatgcaact
ccagagaagaagaaacgacgaatgtaa

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