Populus trichocarpa (black cottonwood): 7475025
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Entry
7475025 CDS
T01077
Name
(RefSeq) hydroxyproline O-arabinosyltransferase NOD3
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
7475025
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7475025
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
7475025
Glycosyltransferases [BR:
pop01003
]
O-Glycan biosynthesis
O-linked Ara type
7475025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPAT
HPAT_C
Motif
Other DBs
NCBI-GeneID:
7475025
NCBI-ProteinID:
XP_002313261
UniProt:
B9HNG7
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All DBs
Position
9:complement(6914153..6918364)
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AA seq
366 aa
AA seq
DB search
MIGRKNMGRASPLLLVLLALGFFFATYNLLTLIIQYKDSSTGLGSGISDPVTGMPANSWK
LGKSNLKFHVALTATDAPYSQWQCRVMYYWYKKMKSMPGSDMGKFTRVLHSGKGDHLMDE
IPTFIVDPLPDGLDRGYIVLNRPWAFVQWLEKATIEEDYILMAEPDHIFANPLPNLAHGD
NPAGFPFFYIKPTEHEKIVRKFYPEEKGPVTDVDPIGNSPVIIKKSLLEEISPTWVNVSL
RMKDDPETDKAFGWVLEMYAYAVASALHGVRHILRKDFMLQPPWDLEVGKRFIIHYTYGC
DYNMKGELTYGKIGEWRFDKRSYLSGPPPKNLTLPPPGVPESVVRLVKMVNEATANIPGW
DSLNSG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagaaaaaatatggggcgagcgtcgccattgctattggtgcttttggcacta
gggtttttctttgccacgtataacttgttgactttgataatacagtataaggattctagt
acaggacttggatcagggatttctgatcctgttacagggatgccagccaattcttggaaa
ttagggaagtcaaatttgaaattccatgttgctcttacggctactgatgctccttatagt
caatggcaatgccgggttatgtattattggtataagaaaatgaaaagcatgccaggatca
gacatgggaaagttcactcgagttttgcattcggggaaaggtgatcatttgatggatgag
attccaacttttattgttgatcctcttccagacggcctagatcggggatatattgtcttg
aatagaccatgggcttttgtgcaatggctggaaaaggcaacaattgaggaagactacatt
ctaatggcagagcctgaccacatattcgcaaatcctttgcctaacttggcacatggagat
aatccagcagggtttccatttttctatattaaaccaactgaacatgagaaaattgttaga
aagttttatcctgaggagaagggtcctgtgacagatgttgatccaattggcaattcccct
gtaataataaaaaagtccctgctggaggaaatttcgccaacatgggtgaatgtttcgtta
agaatgaaagatgacccggagactgataaggcatttggttgggtgctagagatgtatgcc
tatgctgtagcatcagcattgcatggtgtacggcatatacttcgtaaagactttatgcta
cagcctccatgggatttggaagttggtaagagatttatcatccactatacttatggatgc
gactataatatgaagggagaattaacatatggaaagattggagaatggcggtttgacaag
agatcctatctcagtggtcctccaccaaagaacctcaccctgcccccaccaggagttcct
gaaagcgtggtgagacttgtaaagatggtgaatgaggctacagctaacattccaggctgg
gactcattgaacagtggctga
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