KEGG   Populus trichocarpa (black cottonwood): 7475065
Entry
7475065           CDS       T01077                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04142  Lysosome biogenesis
pop04144  Endocytosis
pop04145  Phagosome
pop04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7475065
   04145 Phagosome
    7475065
   04142 Lysosome biogenesis
    7475065
   04148 Efferocytosis
    7475065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7475065
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7475065
   04031 GTP-binding proteins [BR:pop04031]
    7475065
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    7475065
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7475065
  Exosomal proteins of other body fluids (saliva and urine)
   7475065
  Exosomal proteins of colorectal cancer cells
   7475065
  Exosomal proteins of bladder cancer cells
   7475065
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    7475065
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 AAA_7 Septin cobW AAA_22 ATPase_2 AAA_24 PduV-EutP NTPase_1 NACHT MCM TniB AAA_14 AAA_5 ATP-synt_ab
Other DBs
NCBI-GeneID: 7475065
NCBI-ProteinID: XP_002299707
UniProt: B9GG27
LinkDB
Position
1:complement(16152247..16154784)
AA seq 207 aa
MATRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
PEEEIYLPDTIDVAGGGRQQTSTGCEC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggctactcgtagacgcatgctcttgaaggttataattctcggtgacagcggggtaggc
aagacatcactaatgaatcagtatgtgaatcgaaagttcagtaatcaatacaaggcgacg
ataggagctgacttcttaaccaaagaagtccattttgaggatagattgttcacattgcag
atatgggatactgcaggacaagagaggtttcaaagtcttggagtggctttctaccgtggt
gcagactgttgtgttcttgtgcatgatgtgaatgtcatgaagtcatttgagaatcttaat
aattggcgagaagagtttctgattcaggctagcccatccgaccctgaaaacttcccattt
gttgtgttggggaacaagatagatgttgatggaggcaatagtcgagtggtttctgagaag
aaagcgaaggcatggtgcgctgctaagggaaacataccttactttgagacttccgcaaaa
gaaggcttcaatgtggacgctgcatttcagtgcatagccaaaaatgcgcttaagaatgaa
cctgaagaagaaatataccttcctgacaccattgatgttgcgggtggagggcgacaacaa
acgtccaccgggtgcgaatgttga

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