Populus trichocarpa (black cottonwood): 7475065
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Entry
7475065 CDS
T01077
Name
(RefSeq) ras-related protein Rab7
KO
K07897
Ras-related protein Rab-7A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome biogenesis
pop04144
Endocytosis
pop04145
Phagosome
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7475065
04145 Phagosome
7475065
04142 Lysosome biogenesis
7475065
04148 Efferocytosis
7475065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7475065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7475065
04031 GTP-binding proteins [BR:
pop04031
]
7475065
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
7475065
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7475065
Exosomal proteins of other body fluids (saliva and urine)
7475065
Exosomal proteins of colorectal cancer cells
7475065
Exosomal proteins of bladder cancer cells
7475065
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
7475065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
ATP_bind_1
RsgA_GTPase
AAA_16
nSTAND3
AAA_7
Septin
cobW
AAA_22
ATPase_2
AAA_24
PduV-EutP
NTPase_1
NACHT
MCM
TniB
AAA_14
AAA_5
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
7475065
NCBI-ProteinID:
XP_002299707
UniProt:
B9GG27
LinkDB
All DBs
Position
1:complement(16152247..16154784)
Genome browser
AA seq
207 aa
AA seq
DB search
MATRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
PEEEIYLPDTIDVAGGGRQQTSTGCEC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctactcgtagacgcatgctcttgaaggttataattctcggtgacagcggggtaggc
aagacatcactaatgaatcagtatgtgaatcgaaagttcagtaatcaatacaaggcgacg
ataggagctgacttcttaaccaaagaagtccattttgaggatagattgttcacattgcag
atatgggatactgcaggacaagagaggtttcaaagtcttggagtggctttctaccgtggt
gcagactgttgtgttcttgtgcatgatgtgaatgtcatgaagtcatttgagaatcttaat
aattggcgagaagagtttctgattcaggctagcccatccgaccctgaaaacttcccattt
gttgtgttggggaacaagatagatgttgatggaggcaatagtcgagtggtttctgagaag
aaagcgaaggcatggtgcgctgctaagggaaacataccttactttgagacttccgcaaaa
gaaggcttcaatgtggacgctgcatttcagtgcatagccaaaaatgcgcttaagaatgaa
cctgaagaagaaatataccttcctgacaccattgatgttgcgggtggagggcgacaacaa
acgtccaccgggtgcgaatgttga
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