Populus trichocarpa (black cottonwood): 7475082
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Entry
7475082 CDS
T01077
Name
(RefSeq) peroxisome biogenesis protein 2 isoform X2
KO
K06664
peroxin-2 [EC:
2.3.2.27
2.3.2.36
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7475082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7475082
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7475082
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
7475082
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
7475082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
7475082
NCBI-ProteinID:
XP_002299722
UniProt:
B9GG54
LinkDB
All DBs
Position
1:complement(16552865..16558620)
Genome browser
AA seq
341 aa
AA seq
DB search
MSSSNLSQQPPPEDEWIRTYLKLLPEWQPPALSHQSMIPISISRVNQFDAARLDIEMSAM
LKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAMD
SIGKVRTGLEGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWIL
IQRIEGLYKAASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWN
EFSEMLLLLLPLLNSSSIKKFLSPFSKDKSSSSKVDDDTCPICQAIPTIPFLALPCQHRY
CYYCLSTRCAAATSFRCPRCGEAVVAMQRHSSLASNTNPNQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttctaatctttcacaacaaccaccaccagaggatgaatggattcgcacttac
ctaaaattgcttcctgaatggcagcctcctgccctttctcaccagtcgatgataccaatt
tcaatatctagagttaatcaatttgatgctgcaagattggatattgaaatgtcagctatg
ttaaaggaacaattggttaaggtcttctctctgatgaagccaggaatgttatttcaatat
gagccagaacttgatgctttccttgagtttctcatttggaggttctctatttgggtagat
aagcccactccaggaaatgctctcatgaatctgaggtacagagatgaacgtgcaatggat
tcgataggaaaagttagaacaggtttggaaggacctggactgaccattgcacagaaaatt
tggtattgcattgccactgttggtggtcagtacacctgggctcgtttacagtcattctct
gcctttcgtagatggggtgattctgaacagaggccactggcaaggcgtgcatggattttg
atacaacgtattgaaggactttataaagctgcttcatttggaaacctactaatatttctt
tatacaggacgatttagaaacctcattgaaagagtcttgcaagcaaggcttgtctatgga
agccctaatatgaaccgagcagttagctttgagtatatgaatcgccaattagtgtggaat
gaattttcggagatgttgctgctgctactacctcttcttaactcgtcgtccattaaaaaa
tttcttagcccattttcaaaggataaatcttcaagctccaaagtagatgatgatacttgc
cccatttgccaggcaattcccactattccatttcttgctcttccctgtcagcacaggtac
tgctactactgccttagtacacgatgtgctgcagctacatcttttcgctgtcccagatgc
ggcgaggcagtggttgctatgcagcgccatagcagtttagccagtaatacaaatcccaat
cagtga
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