Populus trichocarpa (black cottonwood): 7475100
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Entry
7475100 CDS
T01077
Name
(RefSeq) ABC transporter G family member 29
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7475100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7475100
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7475100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA
AAA_16
AAA_14
AAA_28
AAA_25
Rad17
ABC2_membrane_3
AAA_30
nSTAND3
RsgA_GTPase
PDR_CDR
Motif
Other DBs
NCBI-GeneID:
7475100
NCBI-ProteinID:
XP_024457058
LinkDB
All DBs
Position
1:17115910..17124592
Genome browser
AA seq
1480 aa
AA seq
DB search
MDGVERARASGRRSSHNSLSRSISRSLSRASWNMEDMFSVGRQSRRSNLVDEDEEALKWA
AIEKLPTYNRLRTSIIKSFVDTEDQGNKMLQHKEVDVRKLDINERQNFIDKLFKVAEEDN
EKYLKKFRQRVDKVGIRLPTIEVRFDHLTIEADCHFGTRALPTLPNAARNMFESALGVVG
INLAQRTKLTILKDASGVIKPSRMALLLGPPSSGKTTLLLALAGKLDPSLKVTGDLTYNG
YEFKEFMPRKSSAYISQNDVHIGEMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIF
PEAEVDLFMKATAMEGVESSLITDYTLKILGLDICKDTIVGDDMIRGISGGQKKRVTTGE
MIVGPTKTLFMDEISTGLDSSTTYQIVKCLQHIVHYTEATILVSLLQPAPETFDLFDDII
LLSEGQIVYQGPREHILAFFESCGFRCPERKGTADFLQEVTSKKDQEQYWDDRNKPYRYV
TVPEFVERFKRFHVGMRLENELSVPFDKTQGHKAALSFSKYSVPRMELLKACWDREWILV
KRNAYVYVAKTVQLIIMAIIMSTVFIKSKMHTRNEGDGAVYIGALLFTMIINMFNGFAEL
SLVIKRLPVFYKQRDLQFHPAWTFTLPTFLLQLPMSIIESVVWVSITYYSVGFAPDASRF
FKQLLLVFFIQQMASGLFRLIAGVCRTMIIANTGGALTLLLVFLLGGFILPKGAIPDWWG
WGYWVSPLSYGFNAIAVNEMSAPRWMNKNSSDASTSLGTAVLKNFDVYTDKNWYWIGTAA
ILGFAVLFNVLFTFALAYFSPAGKSQAIISEETTKERTRSTQSLSHSNGNNTSEMAILRT
RSPSNPNGLSGNADSIEAANGVAPKRGMVLPFSPLAMSFDSMNYFVDMPPEMKEQGVPED
RLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGEIKISGFPKKQETF
ARISGYCEQNDIHSPQVTVKESLIYSAFLRLPKEVSKQEKMIFVDEVMELVELNNLKDAV
VGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT
VVCTIHQPSIDIFEAFDELLLMKRGGQAIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNP
ATWMLEVSSVAAEVRLGMDFAEQYRSSSLHQRNKALVKELSTPPPGATNLYFATQYSESA
WGQFKSCLWKQWWTYWRSPDYNLVRYFFTLVCALMVGSIFWKVGTKRDSSSDLNMIIGAM
YASVLFVGINNCSTVQPVVAVERTVFYREKAAGMYSALPYAIAQVVCEIPYVFVQTTYYT
LIVYAMVSFEWTAAKFFWFFFVNFFSFLYFTYYGMMTVSVTPNHQVAAIFAATFYSLFNL
FSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVMDTINVPGRAGADPTIKVYIQ
ENFGYDPDFMGQVAAVLVGFTVFFAFLFAFCIRTLNFQTR
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtagagagagctcgagcttccggtagacgatcaagtcacaacagcttgagc
aggagcataagcaggagcttgagcagggctagttggaacatggaagacatgttttcagtt
ggcaggcaatctaggagaagcaaccttgtcgatgaagatgaagaagctctaaaatgggct
gccatagagaagttaccgacatacaatcggttaagaacaagtatcatcaaatctttcgtg
gatactgaggaccaaggcaacaagatgctgcagcataaagaagttgatgtgagaaagctt
gacataaatgagagacaaaattttatcgacaagctctttaaggttgcagaggaagataat
gagaaatacttgaagaaattcagacaaagagtcgataaggttggcatccgactcccgaca
attgaggtcaggtttgatcatttaacaattgaagctgactgccattttggcaccagagct
ctccccacccttccaaatgctgcaagaaacatgtttgaatcagctcttggtgtagttggg
attaatttggctcagagaactaagctcacaatcctcaaagatgcatctggggttataaaa
ccttcacggatggcactactactaggaccaccatcctcaggaaaaacaactcttttgttg
gctctagcaggaaagttggacccgagtcttaaggttacaggagacctaacatacaatgga
tatgaattcaaggaatttatgccacggaaatcatcagcatatatcagccaaaacgatgtt
cacataggagaaatgaccgtgaaagaaaccttggatttctcagcaaggtgtcaaggggtc
gggacacgatatgatctcctaagtgagcttgcaagaagagagaaggatgctggaatattt
ccggaggcagaagtggatcttttcatgaaggcaactgcaatggaaggagttgaaagcagt
ctcattactgactacacactcaaaatactaggacttgatatatgcaaggataccatcgtc
ggagatgacatgatacgagggatatcgggtggacagaaaaagcgagtgactacaggagag
atgattgttgggcccacaaaaacacttttcatggatgagatatccaccggtctagatagc
tccacaacatatcaaatagtgaagtgcttgcagcacattgtacactacaccgaggctaca
atcttggtgtccctgctccaacctgctcctgagacgtttgatctctttgatgatatcatc
cttttatcagaaggccagattgtttaccagggcccacgagaacacattcttgctttcttt
gagagctgtgggttccgctgtcctgagaggaagggcacagctgatttcttacaagaggtt
acttcgaagaaagaccaggaacagtattgggatgatagaaacaagccatatagatacgta
acagtcccagaatttgttgaaaggttcaagaggttccatgtggggatgaggctagagaat
gagctttccgtgccatttgacaagacccaaggccacaaagcagctctgtcattctcgaag
tattctgttcccagaatggaactactcaaggcatgttgggatcgagaatggatactggtt
aagagaaatgcatatgtttatgtagccaagacggttcaacttattattatggcaattata
atgtccacggtgttcatcaagtctaaaatgcacacaaggaatgaaggagatggagcggta
tacattggtgcccttttgtttactatgatcattaacatgttcaatggttttgctgagctc
tcacttgtaatcaagaggcttccagtattttacaagcaaagagatcttcaattccatcct
gcctggactttcactctgccaactttcttgctacagctgccaatgtctataattgagtct
gttgtttgggtgtcaattacctattactccgttggttttgcacctgacgctagcaggttt
ttcaagcaactgctgctggtatttttcatccaacagatggcttctgggctctttaggctt
attgctggggtctgcagaaccatgatcattgccaacaccggcggggctctcactctactc
cttgttttcttgcttggaggtttcatcttacctaaaggtgccattccagattggtgggga
tggggttattgggtttcacctttgtcttatggtttcaatgccatagctgtgaacgaaatg
tctgcaccaaggtggatgaacaaaaacagttcagacgcctctaccagtttaggcacagca
gtgctcaagaactttgatgtttacacagataagaactggtattggattggcacagctgct
attctaggctttgctgttctattcaatgttctcttcacctttgctctcgcgtactttagt
cctgctggaaaatcacaggccataatctctgaggaaacaacaaaagaaagaaccaggtca
acacagtcgttatcccattctaatggaaacaatacaagtgaaatggcaatcttgagaacg
aggagcccatccaatcccaatggactaagtggaaatgctgattcaattgaggcagcaaat
ggagtggctcctaagagaggaatggttcttcctttctctcctctagccatgtcctttgac
agtatgaattattttgtggacatgcccccggaaatgaaggagcaaggagttccagaggat
aggctgcaactacttcgagaagtaacaggagcatttaggcctggagtactcacggcatta
atgggagtcagtggagctggaaagaccacactgatggatgttttggcaggaagaaagact
ggtggatacattgaaggtgaaattaaaatttccgggttccccaagaaacaggaaacgttt
gcaagaatttctggatattgcgaacagaatgatatccactctcctcaagtcactgttaaa
gaatcattgatttattcagcatttcttcggctccctaaagaagtcagcaaacaagaaaag
atgattttcgtggatgaagtgatggagttggtcgagctaaacaatctcaaggatgctgta
gttgggcttccaggaatcacagggttgtcaacagaacagagaaagaggttaacaatagca
gtggaactggttgctaatccctccatcattttcatggatgaaccaacttctggtcttgat
gcaagggcagctgccattgttatgaggactgtgagaaacactgtggatactgggagaaca
gttgtctgtacgatccatcaacctagcattgacatctttgaagcctttgatgaattgtta
ttaatgaagaggggaggacaagcaatctactcaggaccattgggtcgaaactctcacaag
atcattgaatacttcgaggccattcctggagtccctaaaatcaaagagaagtacaatcca
gcaacatggatgctagaagtgagttcagttgcagctgaagtccggcttggaatggacttt
gcggagcagtacagatcttcatccttgcatcagagaaacaaggctttggtgaaggagttg
agcacaccaccaccaggagcaacaaacctttatttcgccactcagtattcagagtctgca
tgggggcagttcaaatcttgcctttggaagcagtggtggacatactggagaagtcctgat
tacaaccttgttagatacttcttcaccttggtttgtgctcttatggttggtagcatattc
tggaaggtcgggacaaaaagggatagctcaagcgatctgaatatgattatcggtgccatg
tatgcttctgtcttgtttgttggtattaacaactgctcaactgtacaaccagttgtagca
gtcgaaagaaccgtgttttaccgagaaaaagcagctggaatgtattctgcattaccctat
gccattgcacaggttgtttgtgaaataccatacgtatttgttcaaactacatactataca
cttattgtgtatgccatggtgtccttcgaatggactgcagccaaattcttttggttcttc
tttgtcaatttcttttccttcctttacttcacatactatggaatgatgactgtttccgtt
accccaaaccaccaagtagcagccatctttgcagcaacattctattctctcttcaatctt
ttctctggcttctttataccaagaccgaaaattcccaagtggtgggtctggtactattgg
atttgccctgtagcgtggacagtgtatggactaatcgtgtcccaatatggtgatgttatg
gacaccattaatgttcctggtcgcgctggtgctgatcctacaataaaggtttatatacaa
gaaaattttggatatgacccagatttcatggggcaggttgccgcagtcttggttggcttt
acagtcttcttcgcattcctgtttgccttctgcataaggacactgaacttccagacaaga
tag
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integrated database retrieval system
