Populus trichocarpa (black cottonwood): 7475116
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Entry
7475116 CDS
T01077
Name
(RefSeq) 26.5 kDa heat shock protein, mitochondrial isoform X1
KO
K13993
HSP20 family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7475116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7475116
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP20
7475116
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Paralog
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GFIT
Motif
Pfam:
HSP20
ArsA_HSP20
Motif
Other DBs
NCBI-GeneID:
7475116
NCBI-ProteinID:
XP_002299753
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Position
1:complement(17762723..17764410)
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AA seq
243 aa
AA seq
DB search
MSLARLALRNLPQRTSFSASSSVNHGVSIDGVLGGVRRQRWNHDGLLKRFMTTTTSDQIA
GRETSDGKEVAIDKDSDKSKLFRRKKGKKGLWRKSDGIDFVPALYEFFPSGLGNALVQAT
DNINKLFQNLHIPAPSNLIGRVKEKDECYKLRYEVPGVSKEDLKIAIDDGVLTIKGELKE
EEEEGSDGEHWSMRSYGCYNTSIMLPDDAKADEIKAELKDGVLYITIPRTEKPKKDVKEI
DIH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggcacgtttggccttgaggaatttgccccaaaggacgagcttctctgcttct
tcttcagtgaatcatggagttagcattgatggtgttctcggtggggttcgaaggcaaagg
tggaaccatgatgggttgttgaagaggtttatgacaacaacaacaagcgatcaaatagca
ggccgtgagacatcagatggcaaagaagtagctatcgacaaggatagtgacaagtctaag
ctgtttcgcaggaagaaaggcaagaaaggtctctggaggaagagtgatggaattgatttt
gttcctgcactttatgagttttttccttcaggtcttggaaatgcacttgtgcaagcaact
gataacatcaacaagctgttccaaaacttgcatattccggcaccctcgaacctcatcggc
cgcgttaaagagaaagatgaatgctataaattacgatacgaggttccgggtgtatccaag
gaggacttaaagatcgccatcgatgatggggttttgacaataaagggagagctcaaggaa
gaggaggaagaaggatcagacggcgagcactggtcaatgaggagctatggatgttataat
actagcattatgttgcctgatgatgctaaagctgatgaaattaaggctgagttgaaggat
ggtgtgctatacattaccattccaagaactgaaaagcctaaaaaggatgtcaaggagatt
gatatccattaa
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